West Indian T2T · gene

Pa02g2514

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

995
bp
Pa02:66,553,485–66,554,479
genomic location
Record overview

Feature identity

Identifier
Pa02g2514
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
995 bp
Genomic location
Pa02:66,553,485–66,554,479
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: RPL37A | Seed ortholog: 337451.A0A443NFV3 | COG: S | eggNOG OG: Ribosomal_L37e@131567|A-1, Ribosomal_L37e@58023|OJ-19
Gene Ontology
GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0002181 cytoplasmic translation; GO:0003723 RNA binding; GO:0003735 structural constituent of ribosome; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005840 ribosome; GO:0006412 translation; GO:0006941 striated muscle contraction; GO:0007283 spermatogenesis; GO:0008150 biological_process; GO:0008270 zinc ion binding; GO:0019838 growth factor binding; GO:0019843 rRNA binding; GO:0022625 cytosolic large ribosomal subunit; GO:0022626 cytosolic ribosome; GO:0030684 preribosome; GO:0030687 preribosome, large subunit precursor; GO:0045202 synapse; GO:0097371 MDM2/MDM4 family protein binding; GO:0098793 presynapse; GO:0098794 postsynapse; GO:0140236 translation at presynapse; GO:0140242 translation at postsynapse; GO:1901740 negative regulation of myoblast fusion; GO:1901798 positive regulation of signal transduction by p53 class mediator; GO:1990948 ubiquitin ligase inhibitor activity
KEGG
KO: K02922 | Pathway: 03010 | BRITE: 00001, 01610, 03011
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.