Feature identity
- Identifier
- Pa02g3235
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 18,995 bp
- Genomic location
- Pa02:80,313,886–80,332,880
- Strand
- +
West Indian T2T · gene
Pa02g3235
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 18,995
- bp
- Pa02:80,313,886–80,332,880
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: HD5 | Seed ortholog: 29760.F6H159 | COG: S | eggNOG OG: ELK@131567|A-1*, ELK@33090|C-2, ELK@3398|O-4, Homeobox_KN@131567|A-1*, Homeobox_KN@2759|B-2, Homeobox_KN@3193|AW-8, Homeobox_KN@3398|Sa-17, Homeobox_KN@71275|Cfe-32, KNOX1@131567|A-1*, KNOX1@3193|a-6, KNOX1@33090|B-2, KNOX1@3398|y-8, KNOX2@131567|A-1*, KNOX2@3398|m-7, KNOX2@35493|B-2
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0001708 cell fate specification; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009506 plasmodesma; GO:0009901 anther dehiscence; GO:0010051 xylem and phloem pattern formation; GO:0010089 xylem development; GO:0010497 plasmodesmata-mediated intercellular transport; GO:0010930 negative regulation of auxin mediated signaling pathway; GO:0015630 microtubule cytoskeleton; GO:0042802 identical protein binding; GO:0042803 protein homodimerization activity; GO:0043565 sequence-specific DNA binding; GO:0045165 cell fate commitment; GO:0045892 negative regulation of DNA-templated transcription
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa02g3235.1
part_ofgenePa02g3235
