Feature identity
- Identifier
- Pa02g3433
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 15,161 bp
- Genomic location
- Pa02:84,007,243–84,022,403
- Strand
- −
West Indian T2T · gene
Pa02g3433
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 15,161
- bp
- Pa02:84,007,243–84,022,403
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC110790858 | Seed ortholog: 337451.A0A3S3PVB6 | COG: S | eggNOG OG: DEK_C@131567|B-2, DEK_C@1437183|Px-17, DEK_C@2759|K-4, SWIB@131567|B-2, SWIB@3398|AsN-31
- Gene Ontology
- GO:0000500 RNA polymerase I upstream activating factor complex; GO:0001165 RNA polymerase I cis-regulatory region sequence-specific DNA binding; GO:0001181 RNA polymerase I general transcription initiation factor activity; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006325 chromatin organization; GO:0006351 DNA-templated transcription; GO:0006361 transcription initiation at RNA polymerase I promoter; GO:0008150 biological_process; GO:0042790 nucleolar large rRNA transcription by RNA polymerase I; GO:0045943 positive regulation of transcription by RNA polymerase I; GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding
- KEGG
- EC: ec:2.3.2.27 | KO: K15223 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa02g3433.1
part_ofgenePa02g3433
mRNAPa02g3433.2
part_ofgenePa02g3433
