West Indian T2T · gene

Pa02g3504

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

8,960
bp
Pa02:85,484,654–85,493,613
genomic location
Record overview

Feature identity

Identifier
Pa02g3504
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
8,960 bp
Genomic location
Pa02:85,484,654–85,493,613
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: XLG1 | Seed ortholog: 337451.A0A3S3PWK6 | COG: S | eggNOG OG: G-alpha@131567|A-1*, G-alpha@1437183|IF-18, G-alpha@2759|C-2!, G-alpha@3398|Dc-13
Gene Ontology
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000132 establishment of mitotic spindle orientation; GO:0000165 MAPK cascade; GO:0000578 embryonic axis specification; GO:0000742 karyogamy involved in conjugation with cellular fusion; GO:0000743 nuclear migration involved in conjugation with cellular fusion; GO:0000749 response to pheromone triggering conjugation with cellular fusion; GO:0000753 cell morphogenesis involved in conjugation with cellular fusion; GO:0000902 cell morphogenesis; GO:0000909 sporocarp development involved in sexual reproduction; GO:0001402 signal transduction involved in filamentous growth; GO:0001403 invasive growth in response to glucose limitation; GO:0001501 skeletal system development; GO:0001508 action potential; GO:0001525 angiogenesis; GO:0001541 ovarian follicle development; GO:0001555 oocyte growth; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001580 detection of chemical stimulus involved in sensory perception of bitter taste; GO:0001678 intracellular glucose homeostasis; GO:0001701 in utero embryonic development; GO:0001702 gastrulation with mouth forming second; GO:0001737 establishment of imaginal disc-derived wing hair orientation; GO:0001894 tissue homeostasis; GO:0001934 positive regulation of protein phosphorylation; GO:0001958 endochondral ossification; GO:0001973 G protein-coupled adenosine receptor signaling pathway; GO:0001975 response to amphetamine; GO:0002119 nematode larval development; GO:0002165 instar larval or pupal development; GO:0002253 activation of immune response; GO:0002758 innate immune response-activating signaling pathway; GO:0002862 negative regulation of inflammatory response to antigenic stimulus; GO:0003091 renal water homeostasis; GO:0003262 endocardial progenitor cell migration to the midline involved in heart field formation; GO:0003376 sphingosine-1-phosphate receptor signaling pathway; GO:0003380 establishment or maintenance of cytoskeleton polarity involved in gastrulation; GO:0003384 apical constriction involved in gastrulation; GO:0003924 GTPase activity; GO:0005525 GTP binding; GO:0005634 nucleus; GO:0005886 plasma membrane; GO:0005993 trehalose catabolic process; GO:0006109 regulation of carbohydrate metabolic process; GO:0006112 energy reserve metabolic process; GO:0006355 regulation of DNA-templated transcription; GO:0006357 regulation of transcription by RNA polymerase II; GO:0006571 L-tyrosine biosynthetic process; GO:0006638 neutral lipid metabolic process; GO:0006878 intracellular copper ion homeostasis; GO:0006906 vesicle fusion; GO:0006909 phagocytosis; GO:0006935 chemotaxis; GO:0006936 muscle contraction; GO:0006954 inflammatory response; GO:0006972 hyperosmotic response; GO:0007124 pseudohyphal growth; GO:0007165 signal transduction; GO:0007186 G protein-coupled receptor signaling pathway; GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway; GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway; GO:0007190 activation of adenylate cyclase activity; GO:0007191 adenylate cyclase-activating dopamine receptor signaling pathway; GO:0007192 adenylate cyclase-activating serotonin receptor signaling pathway; GO:0007193 adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway; GO:0007194 negative regulation of adenylate cyclase activity; GO:0007195 adenylate cyclase-inhibiting dopamine receptor signaling pathway; GO:0007198 adenylate cyclase-inhibiting serotonin receptor signaling pathway; GO:0007199 G protein-coupled receptor signaling pathway coupled to cGMP nucleotide second messenger; GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway; GO:0007204 positive regulation of cytosolic calcium ion concentration; GO:0007206 phospholipase C-activating G protein-coupled glutamate receptor signaling pathway; GO:0007207 phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway; GO:0007208 phospholipase C-activating serotonin receptor signaling pathway; GO:0007209 phospholipase C-activating tachykinin receptor signaling pathway; GO:0007210 serotonin receptor signaling pathway; GO:0007212 G protein-coupled dopamine receptor signaling pathway; GO:0007213 G protein-coupled acetylcholine receptor signaling pathway; GO:0007214 gamma-aminobutyric acid signaling pathway; GO:0007215 glutamate receptor signaling pathway; GO:0007218 neuropeptide signaling pathway; GO:0007264 small GTPase-mediated signal transduction; GO:0007266 Rho protein signal transduction; GO:0007268 chemical synaptic transmission; GO:0007419 ventral cord development; GO:0007476 imaginal disc-derived wing morphogenesis; GO:0007492 endoderm development; GO:0007498 mesoderm development; GO:0007507 heart development; GO:0007528 neuromuscular junction development; GO:0007584 response to nutrient; GO:0007596 blood coagulation; GO:0007601 visual perception; GO:0007602 phototransduction; GO:0007603 phototransduction, visible light; GO:0007608 sensory perception of smell; GO:0007611 learning or memory; GO:0007614 short-term memory; GO:0007626 locomotory behavior; GO:0007631 feeding behavior; GO:0007632 visual behavior; GO:0007635 chemosensory behavior; GO:0008016 regulation of heart contraction; GO:0008104 intracellular protein localization; GO:0008150 biological_process; GO:0008217 regulation of blood pressure; GO:0008277 regulation of G protein-coupled receptor signaling pathway; GO:0008283 cell population proliferation; GO:0008284 positive regulation of cell population proliferation; GO:0008340 determination of adult lifespan; GO:0008355 olfactory learning; GO:0008356 asymmetric cell division; GO:0008360 regulation of cell shape; GO:0008361 regulation of cell size; GO:0009094 L-phenylalanine biosynthetic process; GO:0009267 cellular response to starvation; GO:0009410 response to xenobiotic stimulus; GO:0009411 response to UV; GO:0009416 response to light stimulus; GO:0009583 detection of light stimulus; GO:0009617 response to bacterium; GO:0009642 response to light intensity; GO:0009649 entrainment of circadian clock; GO:0009653 anatomical structure morphogenesis; GO:0009738 abscisic acid-activated signaling pathway; GO:0009740 gibberellic acid mediated signaling pathway; GO:0009742 brassinosteroid mediated signaling pathway; GO:0009749 response to glucose; GO:0009755 hormone-mediated signaling pathway; GO:0009757 hexose mediated signaling; GO:0009785 blue light signaling pathway; GO:0009789 positive regulation of abscisic acid-activated signaling pathway; GO:0009791 post-embryonic development; GO:0009826 unidimensional cell growth; GO:0009845 seed germination; GO:0009847 spore germination; GO:0009966 regulation of signal transduction; GO:0010004 gastrulation involving germ band extension; GO:0010027 thylakoid membrane organization; GO:0010119 regulation of stomatal movement; GO:0010244 response to low fluence blue light stimulus by blue low-fluence system; GO:0010255 glucose mediated signaling pathway; GO:0010353 response to trehalose; GO:0010467 gene expression; GO:0010468 regulation of gene expression; GO:0010470 regulation of gastrulation; GO:0010476 gibberellin mediated signaling pathway; GO:0010518 positive regulation of phospholipase activity; GO:0010543 regulation of platelet activation; GO:0010619 adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway; GO:0010628 positive regulation of gene expression; GO:0010629 negative regulation of gene expression; GO:0010754 negative regulation of receptor guanylyl cyclase signaling pathway; GO:0010762 regulation of fibroblast migration; GO:0010765 positive regulation of sodium ion transport; GO:0010811 positive regulation of cell-substrate adhesion; GO:0010913 regulation of sterigmatocystin biosynthetic process; GO:0014003 oligodendrocyte development; GO:0014046 dopamine secretion; GO:0014057 positive regulation of acetylcholine secretion, neurotransmission; GO:0014819 regulation of skeletal muscle contraction; GO:0016056 G protein-coupled opsin signaling pathway; GO:0016239 positive regulation of macroautophagy; GO:0016322 neuron remodeling; GO:0016476 regulation of embryonic cell shape; GO:0019236 response to pheromone; GO:0019722 calcium-mediated signaling; GO:0019991 septate junction assembly; GO:0021884 forebrain neuron development; GO:0022400 regulation of opsin-mediated signaling pathway; GO:0022409 positive regulation of cell-cell adhesion; GO:0030041 actin filament polymerization; GO:0030097 hemopoiesis; GO:0030154 cell differentiation; GO:0030168 platelet activation; GO:0030308 negative regulation of cell growth; GO:0030334 regulation of cell migration; GO:0030335 positive regulation of cell migration; GO:0030435 sporulation resulting in formation of a cellular spore; GO:0030437 ascospore formation; GO:0030447 filamentous growth; GO:0030587 sorocarp development; GO:0030866 cortical actin cytoskeleton organization; GO:0030900 forebrain development; GO:0031000 response to caffeine; GO:0031138 negative regulation of conjugation with cellular fusion; GO:0031139 positive regulation of conjugation with cellular fusion; GO:0031152 aggregation involved in sorocarp development; GO:0031157 regulation of aggregate size involved in sorocarp development; GO:0031175 neuron projection development; GO:0032006 regulation of TOR signaling; GO:0032024 positive regulation of insulin secretion; GO:0032094 response to food; GO:0032223 negative regulation of synaptic transmission, cholinergic; GO:0032278 positive regulation of gonadotropin secretion; GO:0032291 axon ensheathment in central nervous system; GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process; GO:0032880 regulation of protein localization; GO:0032930 positive regulation of superoxide anion generation; GO:0032956 regulation of actin cytoskeleton organization; GO:0033864 positive regulation of NAD(P)H oxidase activity; GO:0034097 response to cytokine; GO:0034695 response to prostaglandin E; GO:0035094 response to nicotine; GO:0035116 embryonic hindlimb morphogenesis; GO:0035208 positive regulation of hemocyte proliferation; GO:0035264 multicellular organism growth; GO:0035556 intracellular signal transduction; GO:0035567 non-canonical Wnt signaling pathway; GO:0035774 positive regulation of insulin secretion involved in cellular response to glucose stimulus; GO:0035810 positive regulation of urine volume; GO:0036165 invasive growth in response to heat; GO:0036168 filamentous growth of a population of unicellular organisms in response to heat; GO:0036170 filamentous growth of a population of unicellular organisms in response to starvation; GO:0036178 filamentous growth of a population of unicellular organisms in response to neutral pH; GO:0036180 filamentous growth of a population of unicellular organisms in response to biotic stimulus; GO:0036244 cellular response to neutral pH; GO:0038184 adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway; GO:0040012 regulation of locomotion; GO:0040017 positive regulation of locomotion; GO:0040024 dauer larval development; GO:0040032 post-embryonic body morphogenesis; GO:0042048 olfactory behavior; GO:0042074 cell migration involved in gastrulation; GO:0042127 regulation of cell population proliferation; GO:0042307 positive regulation of protein import into nucleus; GO:0042318 penicillin biosynthetic process; GO:0042417 dopamine metabolic process; GO:0042462 eye photoreceptor cell development; GO:0042475 odontogenesis of dentin-containing tooth; GO:0042542 response to hydrogen peroxide; GO:0042593 glucose homeostasis; GO:0042595 behavioral response to starvation; GO:0042670 retinal cone cell differentiation; GO:0042711 maternal behavior; GO:0042733 embryonic digit morphogenesis; GO:0043010 camera-type eye development; GO:0043050 nematode pharyngeal pumping; GO:0043051 regulation of nematode pharyngeal pumping; GO:0043066 negative regulation of apoptotic process; GO:0043149 stress fiber assembly; GO:0043200 response to amino acid; GO:0043267 negative regulation of potassium ion transport; GO:0043303 mast cell degranulation; GO:0043326 chemotaxis to folate; GO:0043327 chemotaxis to cAMP; GO:0043434 response to peptide hormone; GO:0043519 regulation of myosin II filament organization; GO:0043547 positive regulation of GTPase activity; GO:0043588 skin development; GO:0043938 positive regulation of sporulation; GO:0044182 filamentous growth of a population of unicellular organisms; GO:0044550 secondary metabolite biosynthetic process; GO:0045167 asymmetric protein localization involved in cell fate determination; GO:0045461 sterigmatocystin biosynthetic process; GO:0045542 positive regulation of cholesterol biosynthetic process; GO:0045595 regulation of cell differentiation; GO:0045634 regulation of melanocyte differentiation; GO:0045669 positive regulation of osteoblast differentiation; GO:0045672 positive regulation of osteoclast differentiation; GO:0045744 negative regulation of G protein-coupled receptor signaling pathway; GO:0045776 negative regulation of blood pressure; GO:0045886 negative regulation of synaptic assembly at neuromuscular junction; GO:0045955 negative regulation of calcium ion-dependent exocytosis; GO:0046039 GTP metabolic process; GO:0046069 cGMP catabolic process; GO:0046549 retinal cone cell development; GO:0046662 regulation of egg-laying behavior; GO:0046676 negative regulation of insulin secretion; GO:0046825 regulation of protein export from nucleus; GO:0046907 intracellular transport; GO:0046929 negative regulation of neurotransmitter secretion; GO:0048066 developmental pigmentation; GO:0048148 behavioral response to cocaine; GO:0048315 conidium formation; GO:0048383 mesectoderm development; GO:0048589 developmental growth; GO:0048639 positive regulation of developmental growth; GO:0048680 positive regulation of axon regeneration; GO:0048681 negative regulation of axon regeneration; GO:0048701 embryonic cranial skeleton morphogenesis; GO:0048771 tissue remodeling; GO:0048877 homeostasis of number of retina cells; GO:0048932 myelination of posterior lateral line nerve axons; GO:0050729 positive regulation of inflammatory response; GO:0050766 positive regulation of phagocytosis; GO:0050804 modulation of chemical synaptic transmission; GO:0050805 negative regulation of synaptic transmission; GO:0050821 protein stabilization; GO:0050829 defense response to Gram-negative bacterium; GO:0050830 defense response to Gram-positive bacterium; GO:0050832 defense response to fungus; GO:0050890 cognition; GO:0050908 detection of light stimulus involved in visual perception; GO:0050909 sensory perception of taste; GO:0050913 sensory perception of bitter taste; GO:0050916 sensory perception of sweet taste; GO:0050917 sensory perception of umami taste; GO:0050920 regulation of chemotaxis; GO:0051048 negative regulation of secretion; GO:0051056 regulation of small GTPase mediated signal transduction; GO:0051093 negative regulation of developmental process; GO:0051216 cartilage development; GO:0051294 establishment of spindle orientation; GO:0051301 cell division; GO:0051344 negative regulation of cyclic-nucleotide phosphodiesterase activity; GO:0051489 regulation of filopodium assembly; GO:0051898 negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction; GO:0051924 regulation of calcium ion transport; GO:0051926 negative regulation of calcium ion transport; GO:0051938 L-glutamate import; GO:0055059 asymmetric neuroblast division; GO:0055113 epiboly involved in gastrulation with mouth forming second; GO:0060026 convergent extension; GO:0060027 convergent extension involved in gastrulation; GO:0060041 retina development in camera-type eye; GO:0060158 phospholipase C-activating dopamine receptor signaling pathway; GO:0060176 regulation of aggregation involved in sorocarp development; GO:0060221 retinal rod cell differentiation; GO:0060236 regulation of mitotic spindle organization; GO:0060259 regulation of feeding behavior; GO:0060271 cilium assembly; GO:0060326 cell chemotaxis; GO:0060348 bone development; GO:0060789 hair follicle placode formation; GO:0060828 regulation of canonical Wnt signaling pathway; GO:0060857 establishment of glial blood-brain barrier; GO:0060973 cell migration involved in heart development; GO:0061123 negative regulation of positive chemotaxis to cAMP; GO:0061343 cell adhesion involved in heart morphogenesis; GO:0061760 antifungal innate immune response; GO:0062038 positive regulation of pheromone response MAPK cascade; GO:0070098 chemokine-mediated signaling pathway; GO:0070252 actin-mediated cell contraction; GO:0070374 positive regulation of ERK1 and ERK2 cascade; GO:0070527 platelet aggregation; GO:0071107 response to parathyroid hormone; GO:0071257 cellular response to electrical stimulus; GO:0071321 cellular response to cGMP; GO:0071333 cellular response to glucose stimulus; GO:0071377 cellular response to glucagon stimulus; GO:0071380 cellular response to prostaglandin E stimulus; GO:0071467 cellular response to pH; GO:0071468 cellular response to acidic pH; GO:0071514 genomic imprinting; GO:0071870 cellular response to catecholamine stimulus; GO:0071878 negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway; GO:0071880 adenylate cyclase-activating adrenergic receptor signaling pathway; GO:0071969 fungal-type cell wall (1->3)-beta-D-glucan metabolic process; GO:0072593 reactive oxygen species metabolic process; GO:0072678 T cell migration; GO:0075306 regulation of conidium formation; GO:0075308 negative regulation of conidium formation; GO:0086100 endothelin receptor signaling pathway; GO:0090333 regulation of stomatal closure; GO:0097468 programmed cell death in response to reactive oxygen species; GO:0097700 vascular endothelial cell response to laminar fluid shear stress; GO:0097719 neural tissue regeneration; GO:0098664 G protein-coupled serotonin receptor signaling pathway; GO:0098771 inorganic ion homeostasis; GO:0099170 postsynaptic modulation of chemical synaptic transmission; GO:0099645 neurotransmitter receptor localization to postsynaptic specialization membrane; GO:0106072 negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway; GO:0120162 positive regulation of cold-induced thermogenesis; GO:0120169 detection of cold stimulus involved in thermoception; GO:0120302 background adaptation; GO:0140582 adenylate cyclase-activating G protein-coupled cAMP receptor signaling pathway; GO:0140986 G protein-coupled chemorepellent receptor signaling pathway; GO:0141190 transducin-mediated opsin signaling pathway; GO:0150052 regulation of postsynapse assembly; GO:0150103 reactive gliosis; GO:0160025 sensory perception of itch; GO:0160221 Rho-activating G protein-coupled receptor signaling pathway; GO:0180040 negative regulation of pheromone response MAPK cascade; GO:1900195 positive regulation of oocyte maturation; GO:1900198 positive regulation of penicillin biosynthetic process; GO:1900376 regulation of secondary metabolite biosynthetic process; GO:1900433 positive regulation of filamentous growth of a population of unicellular organisms in response to heat; GO:1900436 positive regulation of filamentous growth of a population of unicellular organisms in response to starvation; GO:1900442 positive regulation of filamentous growth of a population of unicellular organisms in response to neutral pH; GO:1900445 positive regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus; GO:1900452 regulation of long-term synaptic depression; GO:1900454 positive regulation of long-term synaptic depression; GO:1901082 positive regulation of relaxation of smooth muscle; GO:1902074 response to salt; GO:1902474 positive regulation of protein localization to synapse; GO:1903077 negative regulation of protein localization to plasma membrane; GO:1903351 cellular response to dopamine; GO:1903412 response to bile acid; GO:1903665 negative regulation of asexual reproduction; GO:1903998 regulation of eating behavior; GO:1904014 response to serotonin; GO:1904181 positive regulation of membrane depolarization; GO:1904322 cellular response to forskolin; GO:1904390 cone retinal bipolar cell differentiation; GO:1904706 negative regulation of vascular associated smooth muscle cell proliferation; GO:1904707 positive regulation of vascular associated smooth muscle cell proliferation; GO:1904753 negative regulation of vascular associated smooth muscle cell migration; GO:1904776 regulation of protein localization to cell cortex; GO:1904778 positive regulation of protein localization to cell cortex; GO:1904888 cranial skeletal system development; GO:1905301 regulation of macropinocytosis; GO:1990834 response to odorant; GO:2000048 negative regulation of cell-cell adhesion mediated by cadherin; GO:2000114 regulation of establishment of cell polarity; GO:2000179 positive regulation of neural precursor cell proliferation; GO:2000253 positive regulation of feeding behavior; GO:2000292 regulation of defecation; GO:2000828 regulation of parathyroid hormone secretion; GO:2001234 negative regulation of apoptotic signaling pathway
KEGG
EC: ec:3.1.3.16 | KO: K04293, K04346, K04534, K04535, K04630, K04631, K04632, K04633, K04634, K04635, K04636, K04637, K04639, K04640, K13049, K15441, K17500, K18468, K19729, K19860 | Pathway: 01522, 04010, 04011, 04015, 04020, 04022, 04024, 04062, 04068, 04071, 04072, 04080, 04113, 04144, 04261, 04270, 04360, 04361, 04371, 04540, 04611, 04670, 04713, 04714, 04720, 04723, 04724, 04725, 04726, 04727, 04728, 04730, 04740, 04742, 04744, 04745, 04750, 04810, 04911, 04912, 04913, 04914, 04915, 04916, 04918, 04921, 04922, 04923, 04924, 04925, 04926, 04927, 04928, 04929, 04934, 04935, 04961, 04962, 04970, 04971, 04972, 04973, 04976, 05010, 05012, 05016, 05017, 05022, 05030, 05031, 05032, 05034, 05130, 05133, 05135, 05142, 05143, 05145, 05146, 05163, 05165, 05170, 05200, 05207, 05414 | BRITE: 00001, 01000, 01002, 01009, 03016, 04030, 04031, 04131, 04147
Biological context

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