Feature identity
- Identifier
- PaHa05g20330.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 969 bp
- Genomic location
- 5:61,609,182–61,610,597
- Strand
- −
Hass · mRNA
PaHa05g20330.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 969
- bp
- 5:61,609,182–61,610,597
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g20330
- eggNOG
- Preferred name: BHLH93 | Seed ortholog: 337451.A0A443NWM0 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@1437183|LFz-35, HLH@3193|DTB-27, HLH@33090|AAF-17, HLH@35493|Aps-20, HLH@58023|FXH-30
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0031347 regulation of defense response
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g20330.1-protein
derives_frommRNAPaHa05g20330.1
mRNAPaHa05g20330.1
part_ofgenePaHa05g20330
CDS
part_ofPaHa05g20330.1-CDS-5-1787993825:61609182..61609268mRNAPaHa05g20330.1
CDS
part_ofPaHa05g20330.1-CDS-5-1787993825:61609359..61609526mRNAPaHa05g20330.1
CDS
part_ofPaHa05g20330.1-CDS-5-1787993825:61609621..61609788mRNAPaHa05g20330.1
CDS
part_ofPaHa05g20330.1-CDS-5-1787993825:61610052..61610597mRNAPaHa05g20330.1
exon
part_ofPaHa05g20330.1-exon-5-1787993825:61609182..61609268mRNAPaHa05g20330.1
exon
part_ofPaHa05g20330.1-exon-5-1787993825:61609359..61609526mRNAPaHa05g20330.1
exon
part_ofPaHa05g20330.1-exon-5-1787993825:61609621..61609788mRNAPaHa05g20330.1
exon
part_ofPaHa05g20330.1-exon-5-1787993825:61610052..61610597mRNAPaHa05g20330.1
