Feature identity
- Identifier
- Pa02g4669
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 264 bp
- Genomic location
- Pa02:98,284,804–98,285,067
- Strand
- −
West Indian T2T · gene
Pa02g4669
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 264
- bp
- Pa02:98,284,804–98,285,067
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC109010232 | Seed ortholog: 337451.A0A443N8H5 | COG: S | eggNOG OG: zf-CSL@131567|A-1*, zf-CSL@2759|C-2
- Gene Ontology
- GO:0002098 tRNA wobble uridine modification; GO:0002926 tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation; GO:0003674 molecular_function; GO:0005506 iron ion binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0008150 biological_process; GO:0008198 ferrous iron binding; GO:0008270 zinc ion binding; GO:0009055 electron transfer activity; GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors; GO:0017183 protein histidyl modification to diphthamide; GO:0031981 nuclear lumen; GO:0032991 protein-containing complex; GO:0034986 iron chaperone activity; GO:0048471 perinuclear region of cytoplasm; GO:0050709 negative regulation of protein secretion; GO:0051099 positive regulation of binding; GO:0090560 2-(3-amino-3-carboxypropyl)histidine synthase activity
- KEGG
- EC: ec:1.2.4.1 | KO: K15455 | Pathway: 00010, 00020, 00620, 00785, 01100, 01200, 01210 | Module: M00307 | BRITE: 00001, 03012, 03016
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa02g4669.1
part_ofgenePa02g4669
