Feature identity
- Identifier
- Pa02g5167
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 15,138 bp
- Genomic location
- Pa02:104,973,140–104,988,277
- Strand
- −
West Indian T2T · gene
Pa02g5167
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 15,138
- bp
- Pa02:104,973,140–104,988,277
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: PEX10 | Seed ortholog: 337451.A0A3S3MUP1 | COG: S | eggNOG OG: Pex2_Pex12@131567|A-1*, Pex2_Pex12@2759|D-3, zf-RING_2@131567|dG-20, zf-RING_2@2759|wv-22
- Gene Ontology
- GO:0004842 ubiquitin-protein transferase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005777 peroxisome; GO:0005778 peroxisomal membrane; GO:0005829 cytosol; GO:0006513 protein monoubiquitination; GO:0006635 fatty acid beta-oxidation; GO:0007031 peroxisome organization; GO:0009793 embryo development ending in seed dormancy; GO:0009853 photorespiration; GO:0016558 protein import into peroxisome matrix; GO:0061630 ubiquitin protein ligase activity
- KEGG
- EC: ec:2.3.2.27, ec:6.1.1.2 | KO: K13346 | Pathway: 04146 | BRITE: 00001, 04121
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa02g5167.1
part_ofgenePa02g5167
