West Indian T2T · gene

Pa03g0780

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

5,321
bp
Pa03:11,722,431–11,727,751
genomic location
Record overview

Feature identity

Identifier
Pa03g0780
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
5,321 bp
Genomic location
Pa03:11,722,431–11,727,751
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC109021062 | Seed ortholog: 337451.A0A443NB81 | COG: S | eggNOG OG: GST_C@131567|FG-12, GST_C@3398|KFQ-34, GST_C@58023|Cya-26, GST_N@131567|BF-8, GST_N@1437183|DzS-26, GST_N@3398|DLt-25, GST_N@58023|AvD-21
Gene Ontology
GO:0000302 response to reactive oxygen species; GO:0000303 response to superoxide; GO:0004364 glutathione transferase activity; GO:0005604 basement membrane; GO:0005737 cytoplasm; GO:0006979 response to oxidative stress; GO:0010880 regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum; GO:0010881 regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion; GO:0014810 positive regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion; GO:0016209 antioxidant activity; GO:0016491 oxidoreductase activity; GO:0019852 L-ascorbic acid metabolic process; GO:0019853 L-ascorbic acid biosynthetic process; GO:0030424 axon; GO:0031965 nuclear membrane; GO:0042178 xenobiotic catabolic process; GO:0044297 cell body; GO:0045174 glutathione dehydrogenase (ascorbate) activity; GO:0050610 methylarsonate reductase activity; GO:0051280 negative regulation of release of sequestered calcium ion into cytosol; GO:0051281 positive regulation of release of sequestered calcium ion into cytosol; GO:0061687 detoxification of inorganic compound; GO:0071243 cellular response to arsenic-containing substance
KEGG
EC: ec:2.5.1.18 | KO: K00799 | Pathway: 00480, 01100 | BRITE: 00001, 01000, 02000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.