Feature identity
- Identifier
- PaHa02g17900.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 300 bp
- Genomic location
- 2:37,538,116–37,539,190
- Strand
- +
Hass · mRNA
PaHa02g17900.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 300
- bp
- 2:37,538,116–37,539,190
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g17900
- eggNOG
- Preferred name: TCX4 | Seed ortholog: 337451.A0A3S4N451 | COG: S | eggNOG OG: TCR@131221|Lt-19, TCR@131567|A-1*, TCR@2759|AQ-7!
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- KO: K21776 | Pathway: 04218, 04814 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g17900.1-protein
derives_frommRNAPaHa02g17900.1
mRNAPaHa02g17900.1
part_ofgenePaHa02g17900
CDS
part_ofPaHa02g17900.1-CDS-2-1787993825:37538116..37538304mRNAPaHa02g17900.1
CDS
part_ofPaHa02g17900.1-CDS-2-1787993825:37538988..37539076mRNAPaHa02g17900.1
CDS
part_ofPaHa02g17900.1-CDS-2-1787993825:37539169..37539190mRNAPaHa02g17900.1
exon
part_ofPaHa02g17900.1-exon-2-1787993825:37538116..37538304mRNAPaHa02g17900.1
exon
part_ofPaHa02g17900.1-exon-2-1787993825:37538988..37539076mRNAPaHa02g17900.1
exon
part_ofPaHa02g17900.1-exon-2-1787993825:37539169..37539190mRNAPaHa02g17900.1
