Feature identity
- Identifier
- Pa04g2506
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 9,071 bp
- Genomic location
- Pa04:51,279,720–51,288,790
- Strand
- +
West Indian T2T · gene
Pa04g2506
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 9,071
- bp
- Pa04:51,279,720–51,288,790
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: BnaC02g34490D, LOC104593888 | Seed ortholog: 106549.A0A540MBD7, 337451.A0A3S3QTK4 | COG: COG0451, S | eggNOG OG: Epimerase@131567|KJ-12, Epimerase@3398|MrR-29, Epimerase@58023|LCF-28, START@131567|e-5, START@2759|BT-8, START@3749|Agl-23
- Gene Ontology
- GO:0004022 alcohol dehydrogenase (NAD+) activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0008106 alcohol dehydrogenase (NADP+) activity; GO:0008150 biological_process; GO:0009407 toxin catabolic process; GO:0009507 chloroplast; GO:0009555 pollen development; GO:0009646 response to absence of light; GO:0009718 anthocyanin-containing compound biosynthetic process; GO:0009723 response to ethylene; GO:0009751 response to salicylic acid; GO:0009813 flavonoid biosynthetic process; GO:0009964 negative regulation of flavonoid biosynthetic process; GO:0010008 endosome membrane; GO:0010422 regulation of brassinosteroid biosynthetic process; GO:0010584 pollen exine formation; GO:0016131 brassinosteroid metabolic process; GO:0016491 oxidoreductase activity; GO:0016621 cinnamoyl-CoA reductase (NADP+) activity; GO:0016854 racemase and epimerase activity; GO:0033729 anthocyanidin reductase activity; GO:0042406 extrinsic component of endoplasmic reticulum membrane; GO:0043473 pigmentation; GO:0045552 dihydroflavanol 4-reductase activity; GO:0048316 seed development; GO:0050661 NADP binding; GO:0050832 defense response to fungus; GO:0070273 phosphatidylinositol-4-phosphate binding; GO:0080110 sporopollenin biosynthetic process; GO:0102386 phenylacetaldehyde reductase activity; GO:1900056 negative regulation of leaf senescence; GO:1900150 regulation of defense response to fungus
- KEGG
- EC: ec:1.1.1.219, ec:1.1.1.234, ec:1.1.1.348, ec:1.1.1.415, ec:1.2.1.44, ec:1.3.1.112, ec:1.3.1.77 | KO: K08695, K09753, K10779, K13082, K13265, K21102, K22098 | Pathway: 00940, 00941, 00943, 01100, 01110 | Module: M00039, M00138, M00942, M00946 | BRITE: 00001, 01000, 03000, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa04g2506.1
part_ofgenePa04g2506
mRNAPa04g2506.2
part_ofgenePa04g2506
