Feature identity
- Identifier
- PaHa01g17620.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,107 bp
- Genomic location
- 1:29,078,973–29,087,734
- Strand
- −
Hass · mRNA
PaHa01g17620.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,107
- bp
- 1:29,078,973–29,087,734
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g17620
- eggNOG
- Preferred name: LOC103719222 | Seed ortholog: 337451.A0A443NMQ5 | COG: S | eggNOG OG: PCI@131567|LE-15, eIF3_N@2759|A-1
- Gene Ontology
- GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005852 eukaryotic translation initiation factor 3 complex; GO:0006352 DNA-templated transcription initiation; GO:0006412 translation; GO:0008180 COP9 signalosome; GO:0009640 photomorphogenesis; GO:0009908 flower development; GO:0030371 translation repressor activity; GO:0031597 cytosolic proteasome complex
- KEGG
- EC: ec:2.6.1.62, ec:6.3.3.3 | KO: K03250 | Pathway: 03010 | Module: M00123 | BRITE: 00001, 03012, 03051, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g17620.1-protein
derives_frommRNAPaHa01g17620.1
mRNAPaHa01g17620.1
part_ofgenePaHa01g17620
CDS
part_ofPaHa01g17620.1-CDS-1-1787993825:29078973..29079075mRNAPaHa01g17620.1
CDS
part_ofPaHa01g17620.1-CDS-1-1787993825:29079499..29079636mRNAPaHa01g17620.1
CDS
part_ofPaHa01g17620.1-CDS-1-1787993825:29080672..29080814mRNAPaHa01g17620.1
CDS
part_ofPaHa01g17620.1-CDS-1-1787993825:29081923..29082142mRNAPaHa01g17620.1
CDS
part_ofPaHa01g17620.1-CDS-1-1787993825:29084298..29084419mRNAPaHa01g17620.1
CDS
part_ofPaHa01g17620.1-CDS-1-1787993825:29084508..29084735mRNAPaHa01g17620.1
CDS
part_ofPaHa01g17620.1-CDS-1-1787993825:29087582..29087734mRNAPaHa01g17620.1
exon
part_ofPaHa01g17620.1-exon-1-1787993825:29078973..29079075mRNAPaHa01g17620.1
exon
part_ofPaHa01g17620.1-exon-1-1787993825:29079499..29079636mRNAPaHa01g17620.1
exon
part_ofPaHa01g17620.1-exon-1-1787993825:29080672..29080814mRNAPaHa01g17620.1
exon
part_ofPaHa01g17620.1-exon-1-1787993825:29081923..29082142mRNAPaHa01g17620.1
exon
part_ofPaHa01g17620.1-exon-1-1787993825:29084298..29084419mRNAPaHa01g17620.1
exon
part_ofPaHa01g17620.1-exon-1-1787993825:29084508..29084735mRNAPaHa01g17620.1
exon
part_ofPaHa01g17620.1-exon-1-1787993825:29087582..29087734mRNAPaHa01g17620.1
