Feature identity
- Identifier
- PaHa05g30000.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,134 bp
- Genomic location
- 5:76,339,367–76,347,401
- Strand
- +
Hass · mRNA
PaHa05g30000.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,134
- bp
- 5:76,339,367–76,347,401
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g30000
- eggNOG
- Preferred name: NFYA2 | Seed ortholog: 337451.A0A3S4NVD2 | COG: S | eggNOG OG: CBFB_NFYA@2759|A-1, CBFB_NFYA@33090|u-9, CBFB_NFYA@3398|BF-12
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009567 double fertilization forming a zygote and endosperm; GO:0016602 CCAAT-binding factor complex; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- KO: K08064 | Pathway: 04612, 05017, 05152 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g30000.1-protein
derives_frommRNAPaHa05g30000.1
mRNAPaHa05g30000.1
part_ofgenePaHa05g30000
CDS
part_ofPaHa05g30000.1-CDS-5-1787993825:76339367..76339631mRNAPaHa05g30000.1
CDS
part_ofPaHa05g30000.1-CDS-5-1787993825:76343056..76343174mRNAPaHa05g30000.1
CDS
part_ofPaHa05g30000.1-CDS-5-1787993825:76343275..76343343mRNAPaHa05g30000.1
CDS
part_ofPaHa05g30000.1-CDS-5-1787993825:76344980..76345120mRNAPaHa05g30000.1
CDS
part_ofPaHa05g30000.1-CDS-5-1787993825:76346793..76347189mRNAPaHa05g30000.1
CDS
part_ofPaHa05g30000.1-CDS-5-1787993825:76347259..76347401mRNAPaHa05g30000.1
exon
part_ofPaHa05g30000.1-exon-5-1787993825:76339367..76339631mRNAPaHa05g30000.1
exon
part_ofPaHa05g30000.1-exon-5-1787993825:76343056..76343174mRNAPaHa05g30000.1
exon
part_ofPaHa05g30000.1-exon-5-1787993825:76343275..76343343mRNAPaHa05g30000.1
exon
part_ofPaHa05g30000.1-exon-5-1787993825:76344980..76345120mRNAPaHa05g30000.1
exon
part_ofPaHa05g30000.1-exon-5-1787993825:76346793..76347189mRNAPaHa05g30000.1
exon
part_ofPaHa05g30000.1-exon-5-1787993825:76347259..76347401mRNAPaHa05g30000.1
