Feature identity
- Identifier
- PaHa05g31530.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 486 bp
- Genomic location
- 5:78,316,358–78,321,173
- Strand
- +
Hass · mRNA
PaHa05g31530.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 486
- bp
- 5:78,316,358–78,321,173
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g31530
- eggNOG
- Preferred name: DR1 | Seed ortholog: 13333.W1P7C1 | COG: COG2036 | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@2759|IE-16
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- KO: K21751 | BRITE: 00001, 03021, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g31530.1-protein
derives_frommRNAPaHa05g31530.1
mRNAPaHa05g31530.1
part_ofgenePaHa05g31530
CDS
part_ofPaHa05g31530.1-CDS-5-1787993825:78316358..78316412mRNAPaHa05g31530.1
CDS
part_ofPaHa05g31530.1-CDS-5-1787993825:78317442..78317531mRNAPaHa05g31530.1
CDS
part_ofPaHa05g31530.1-CDS-5-1787993825:78318979..78319097mRNAPaHa05g31530.1
CDS
part_ofPaHa05g31530.1-CDS-5-1787993825:78320481..78320549mRNAPaHa05g31530.1
CDS
part_ofPaHa05g31530.1-CDS-5-1787993825:78321021..78321173mRNAPaHa05g31530.1
exon
part_ofPaHa05g31530.1-exon-5-1787993825:78316358..78316412mRNAPaHa05g31530.1
exon
part_ofPaHa05g31530.1-exon-5-1787993825:78317442..78317531mRNAPaHa05g31530.1
exon
part_ofPaHa05g31530.1-exon-5-1787993825:78318979..78319097mRNAPaHa05g31530.1
exon
part_ofPaHa05g31530.1-exon-5-1787993825:78320481..78320549mRNAPaHa05g31530.1
exon
part_ofPaHa05g31530.1-exon-5-1787993825:78321021..78321173mRNAPaHa05g31530.1
