Feature identity
- Identifier
- PaHa05g31710.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,746 bp
- Genomic location
- 5:78,501,341–78,506,849
- Strand
- +
Hass · mRNA
PaHa05g31710.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,746
- bp
- 5:78,501,341–78,506,849
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g31710
- eggNOG
- Preferred name: LOC107762433 | Seed ortholog: 337451.A0A3S3NL90 | eggNOG OG: Response_reg|849BT8@1437183, Response_reg|849BT8@3398
- Gene Ontology
- GO:0000156 phosphorelay response regulator activity; GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009736 cytokinin-activated signaling pathway
- KEGG
- KO: K14491 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g31710.1-protein
derives_frommRNAPaHa05g31710.1
mRNAPaHa05g31710.1
part_ofgenePaHa05g31710
CDS
part_ofPaHa05g31710.1-CDS-5-1787993825:78501341..78501470mRNAPaHa05g31710.1
CDS
part_ofPaHa05g31710.1-CDS-5-1787993825:78501579..78502001mRNAPaHa05g31710.1
CDS
part_ofPaHa05g31710.1-CDS-5-1787993825:78502119..78502195mRNAPaHa05g31710.1
CDS
part_ofPaHa05g31710.1-CDS-5-1787993825:78505216..78506229mRNAPaHa05g31710.1
CDS
part_ofPaHa05g31710.1-CDS-5-1787993825:78506748..78506849mRNAPaHa05g31710.1
exon
part_ofPaHa05g31710.1-exon-5-1787993825:78501341..78501470mRNAPaHa05g31710.1
exon
part_ofPaHa05g31710.1-exon-5-1787993825:78501579..78502001mRNAPaHa05g31710.1
exon
part_ofPaHa05g31710.1-exon-5-1787993825:78502119..78502195mRNAPaHa05g31710.1
exon
part_ofPaHa05g31710.1-exon-5-1787993825:78505216..78506229mRNAPaHa05g31710.1
exon
part_ofPaHa05g31710.1-exon-5-1787993825:78506748..78506849mRNAPaHa05g31710.1
