Feature identity
- Identifier
- PaHa05g32230.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 612 bp
- Genomic location
- 5:79,285,737–79,295,112
- Strand
- +
Hass · mRNA
PaHa05g32230.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 612
- bp
- 5:79,285,737–79,295,112
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g32230
- eggNOG
- Preferred name: M17 | Seed ortholog: 337451.A0A443NTW1 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|F-3, K-box@3398|Fk-11, K-box@35493|AZ-7, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3193|sn-21, SRF-TF@3398|BFt-26, SRF-TF@35493|bP-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0019252 starch biosynthetic process; GO:0043068 positive regulation of programmed cell death; GO:0048316 seed development
- KEGG
- KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g32230.1-protein
derives_frommRNAPaHa05g32230.1
mRNAPaHa05g32230.1
part_ofgenePaHa05g32230
CDS
part_ofPaHa05g32230.1-CDS-5-1787993825:79285737..79285924mRNAPaHa05g32230.1
CDS
part_ofPaHa05g32230.1-CDS-5-1787993825:79292083..79292149mRNAPaHa05g32230.1
CDS
part_ofPaHa05g32230.1-CDS-5-1787993825:79292217..79292378mRNAPaHa05g32230.1
CDS
part_ofPaHa05g32230.1-CDS-5-1787993825:79293711..79293752mRNAPaHa05g32230.1
CDS
part_ofPaHa05g32230.1-CDS-5-1787993825:79293961..79294002mRNAPaHa05g32230.1
CDS
part_ofPaHa05g32230.1-CDS-5-1787993825:79294561..79294593mRNAPaHa05g32230.1
CDS
part_ofPaHa05g32230.1-CDS-5-1787993825:79294728..79294754mRNAPaHa05g32230.1
CDS
part_ofPaHa05g32230.1-CDS-5-1787993825:79295062..79295112mRNAPaHa05g32230.1
exon
part_ofPaHa05g32230.1-exon-5-1787993825:79285737..79285924mRNAPaHa05g32230.1
exon
part_ofPaHa05g32230.1-exon-5-1787993825:79292083..79292149mRNAPaHa05g32230.1
exon
part_ofPaHa05g32230.1-exon-5-1787993825:79292217..79292378mRNAPaHa05g32230.1
exon
part_ofPaHa05g32230.1-exon-5-1787993825:79293711..79293752mRNAPaHa05g32230.1
exon
part_ofPaHa05g32230.1-exon-5-1787993825:79293961..79294002mRNAPaHa05g32230.1
exon
part_ofPaHa05g32230.1-exon-5-1787993825:79294561..79294593mRNAPaHa05g32230.1
exon
part_ofPaHa05g32230.1-exon-5-1787993825:79294728..79294754mRNAPaHa05g32230.1
exon
part_ofPaHa05g32230.1-exon-5-1787993825:79295062..79295112mRNAPaHa05g32230.1
