Feature identity
- Identifier
- PaHa05g33110.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,371 bp
- Genomic location
- 5:81,188,352–81,203,602
- Strand
- −
Hass · mRNA
PaHa05g33110.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,371
- bp
- 5:81,188,352–81,203,602
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g33110
- eggNOG
- Preferred name: LOC104590796 | Seed ortholog: 337451.A0A3S3MT18 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|CB-10, WRKY@33090|Ls-15, WRKY@58023|er-19
- Gene Ontology
- GO:0001217 DNA-binding transcription repressor activity; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009408 response to heat; GO:0009555 pollen development; GO:0009793 embryo development ending in seed dormancy; GO:0140921 negative regulation of thermomorphogenesis
- KEGG
- KO: K13425 | Pathway: 04016, 04626 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g33110.1-protein
derives_frommRNAPaHa05g33110.1
mRNAPaHa05g33110.1
part_ofgenePaHa05g33110
CDS
part_ofPaHa05g33110.1-CDS-5-1787993825:81188352..81188426mRNAPaHa05g33110.1
CDS
part_ofPaHa05g33110.1-CDS-5-1787993825:81191215..81191227mRNAPaHa05g33110.1
CDS
part_ofPaHa05g33110.1-CDS-5-1787993825:81200111..81200668mRNAPaHa05g33110.1
CDS
part_ofPaHa05g33110.1-CDS-5-1787993825:81201425..81201565mRNAPaHa05g33110.1
CDS
part_ofPaHa05g33110.1-CDS-5-1787993825:81203019..81203602mRNAPaHa05g33110.1
exon
part_ofPaHa05g33110.1-exon-5-1787993825:81188352..81188426mRNAPaHa05g33110.1
exon
part_ofPaHa05g33110.1-exon-5-1787993825:81191215..81191227mRNAPaHa05g33110.1
exon
part_ofPaHa05g33110.1-exon-5-1787993825:81200111..81200668mRNAPaHa05g33110.1
exon
part_ofPaHa05g33110.1-exon-5-1787993825:81201425..81201565mRNAPaHa05g33110.1
exon
part_ofPaHa05g33110.1-exon-5-1787993825:81203019..81203602mRNAPaHa05g33110.1
