Feature identity
- Identifier
- PaHa05g33890.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,496 bp
- Genomic location
- 5:82,331,607–82,339,901
- Strand
- +
Hass · mRNA
PaHa05g33890.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,496
- bp
- 5:82,331,607–82,339,901
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g33890
- eggNOG
- Preferred name: ARF17 | Seed ortholog: 337451.A0A3S3N6N3 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|xW-20, AUX_IAA@3398|Aeu-24, Auxin_resp@131221|y-7, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3193|Aa-8, Auxin_resp@3398|Dy-12, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AqU-23, B3@33090|Id-12, B3@3398|BZk-26!
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009908 flower development
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g33890.1-protein
derives_frommRNAPaHa05g33890.1
mRNAPaHa05g33890.1
part_ofgenePaHa05g33890
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82331607..82331640mRNAPaHa05g33890.1
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82332159..82332271mRNAPaHa05g33890.1
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82332587..82332685mRNAPaHa05g33890.1
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82332764..82332820mRNAPaHa05g33890.1
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82332930..82333085mRNAPaHa05g33890.1
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82333206..82333290mRNAPaHa05g33890.1
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82335444..82335534mRNAPaHa05g33890.1
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82335639..82335803mRNAPaHa05g33890.1
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82335876..82335998mRNAPaHa05g33890.1
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82336397..82336472mRNAPaHa05g33890.1
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82336694..82336841mRNAPaHa05g33890.1
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82336996..82338149mRNAPaHa05g33890.1
CDS
part_ofPaHa05g33890.1-CDS-5-1787993825:82339707..82339901mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82331607..82331640mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82332159..82332271mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82332587..82332685mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82332764..82332820mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82332930..82333085mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82333206..82333290mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82335444..82335534mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82335639..82335803mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82335876..82335998mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82336397..82336472mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82336694..82336841mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82336996..82338149mRNAPaHa05g33890.1
exon
part_ofPaHa05g33890.1-exon-5-1787993825:82339707..82339901mRNAPaHa05g33890.1
