West Indian T2T · gene

Pa06g1663

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

5,670
bp
Pa06:27,930,297–27,935,966
genomic location
Record overview

Feature identity

Identifier
Pa06g1663
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
5,670 bp
Genomic location
Pa06:27,930,297–27,935,966
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: FAH1 | Seed ortholog: 337451.A0A3S3NJ79 | COG: COG3000 | eggNOG OG: FA_hydroxylase@131567|N-4, FA_hydroxylase@3193|BBA-23, FA_hydroxylase@3398|CqG-27
Gene Ontology
GO:0000038 very long-chain fatty acid metabolic process; GO:0001949 sebaceous gland cell differentiation; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0006631 fatty acid metabolic process; GO:0006673 inositol phosphoceramide metabolic process; GO:0006675 mannosyl-inositol phosphorylceramide metabolic process; GO:0006679 glucosylceramide biosynthetic process; GO:0006682 galactosylceramide biosynthetic process; GO:0030148 sphingolipid biosynthetic process; GO:0030258 lipid modification; GO:0032286 central nervous system myelin maintenance; GO:0032287 peripheral nervous system myelin maintenance; GO:0042127 regulation of cell population proliferation; GO:0042634 regulation of hair cycle; GO:0044857 plasma membrane raft organization; GO:0046513 ceramide biosynthetic process; GO:0051999 mannosyl-inositol phosphorylceramide biosynthetic process; GO:0061436 establishment of skin barrier; GO:0102771 dihydroceramide fatty acyl 2-hydroxylase activity
KEGG
EC: ec:1.14.18.7 | KO: K19706 | BRITE: 00001, 01000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.