West Indian T2T · gene

Pa06g1818

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

37,955
bp
Pa06:39,293,800–39,331,754
genomic location
Record overview

Feature identity

Identifier
Pa06g1818
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
37,955 bp
Genomic location
Pa06:39,293,800–39,331,754
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: ATP8B2, LOC107770673 | Seed ortholog: 337451.A0A443PCW3, 337451.A0A443PCX1, 56857.A0A200QPJ1 | COG: S | eggNOG OG: Cation_ATPase@131567|C-2, Cation_ATPase@2759|Xc-18, Cation_ATPase@3193|Bkp-30, Cation_ATPase@33090|ATe-24, Cation_ATPase@3398|CeX-33, PhoLip_ATPase_C@131567|A-1*, PhoLip_ATPase_C@2759|Ei-11!, PhoLip_ATPase_C@3193|sI-23, PhoLip_ATPase_C@33090|SO-17, PhoLip_ATPase_C@3398|AJY-26, PhoLip_ATPase_N@131567|A-1*, PhoLip_ATPase_N@2759|EJ-11, PhoLip_ATPase_N@3193|xI-24, PhoLip_ATPase_N@33090|Tk-18, PhoLip_ATPase_N@3398|ALe-26
Gene Ontology
GO:0000139 Golgi membrane; GO:0000935 division septum; GO:0001411 hyphal tip; GO:0001669 acrosomal vesicle; GO:0002237 response to molecule of bacterial origin; GO:0002238 response to molecule of fungal origin; GO:0003011 involuntary skeletal muscle contraction; GO:0004383 guanylate cyclase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005768 endosome; GO:0005769 early endosome; GO:0005770 late endosome; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0005794 Golgi apparatus; GO:0005802 trans-Golgi network; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006182 cGMP biosynthetic process; GO:0006812 monoatomic cation transport; GO:0006892 post-Golgi vesicle-mediated transport; GO:0006893 Golgi to plasma membrane transport; GO:0006897 endocytosis; GO:0007009 plasma membrane organization; GO:0007040 lysosome organization; GO:0007124 pseudohyphal growth; GO:0007165 signal transduction; GO:0007409 axonogenesis; GO:0007612 learning; GO:0008104 intracellular protein localization; GO:0008270 zinc ion binding; GO:0008285 negative regulation of cell population proliferation; GO:0008340 determination of adult lifespan; GO:0009506 plasmodesma; GO:0009860 pollen tube growth; GO:0009941 chloroplast envelope; GO:0010008 endosome membrane; GO:0010183 pollen tube guidance; GO:0010286 heat acclimation; GO:0010447 response to acidic pH; GO:0010842 retina layer formation; GO:0010976 positive regulation of neuron projection development; GO:0010996 response to auditory stimulus; GO:0012505 endomembrane system; GO:0015247 aminophospholipid flippase activity; GO:0015662 P-type ion transporter activity; GO:0015914 phospholipid transport; GO:0016020 membrane; GO:0016192 vesicle-mediated transport; GO:0016323 basolateral plasma membrane; GO:0016324 apical plasma membrane; GO:0019216 regulation of lipid metabolic process; GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity; GO:0030140 trans-Golgi network transport vesicle; GO:0030335 positive regulation of cell migration; GO:0030659 cytoplasmic vesicle membrane; GO:0030672 synaptic vesicle membrane; GO:0031090 organelle membrane; GO:0031175 neuron projection development; GO:0031410 cytoplasmic vesicle; GO:0031521 spitzenkorper; GO:0031901 early endosome membrane; GO:0031982 vesicle; GO:0032456 endocytic recycling; GO:0032588 trans-Golgi network membrane; GO:0034220 monoatomic ion transmembrane transport; GO:0035577 azurophil granule membrane; GO:0035579 specific granule membrane; GO:0035865 cellular response to potassium ion; GO:0040018 positive regulation of multicellular organism growth; GO:0042472 inner ear morphogenesis; GO:0042742 defense response to bacterium; GO:0042755 eating behavior; GO:0043588 skin development; GO:0045202 synapse; GO:0045332 phospholipid translocation; GO:0048194 Golgi vesicle budding; GO:0048364 root development; GO:0048367 shoot system development; GO:0048488 synaptic vesicle endocytosis; GO:0048666 neuron development; GO:0050832 defense response to fungus; GO:0050884 neuromuscular process controlling posture; GO:0050908 detection of light stimulus involved in visual perception; GO:0055037 recycling endosome; GO:0055038 recycling endosome membrane; GO:0060052 neurofilament cytoskeleton organization; GO:0060100 positive regulation of phagocytosis, engulfment; GO:0060101 negative regulation of phagocytosis, engulfment; GO:0061092 positive regulation of phospholipid translocation; GO:0070062 extracellular exosome; GO:0070273 phosphatidylinositol-4-phosphate binding; GO:0070867 mating projection tip membrane; GO:0075293 response to host pH environment; GO:0090404 pollen tube tip; GO:0090554 phosphatidylcholine floppase activity; GO:0090555 phosphatidylethanolamine flippase activity; GO:0090556 phosphatidylserine floppase activity; GO:0097225 sperm midpiece; GO:0097227 sperm annulus; GO:0097381 photoreceptor disc membrane; GO:0098978 glutamatergic synapse; GO:0140326 ATPase-coupled intramembrane lipid carrier activity; GO:0140327 flippase activity; GO:0140331 aminophospholipid translocation; GO:0140333 glycerophospholipid flippase activity; GO:0140345 phosphatidylcholine flippase activity; GO:0140346 phosphatidylserine flippase activity; GO:0150104 transport across blood-brain barrier; GO:1901703 protein localization involved in auxin polar transport; GO:1903307 positive regulation of regulated secretory pathway; GO:1990530 Cdc50p-Drs2p complex; GO:1990531 phospholipid-translocating ATPase complex; GO:2000147 positive regulation of cell motility
KEGG
EC: ec:4.6.1.2, ec:7.6.2.1 | KO: K01530, K01769, K14802 | Pathway: 00230, 01100, 04148 | BRITE: 00001, 01000, 03009
Biological context

Connected feature records

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