West Indian T2T · gene

Pa06g3210

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

3,405
bp
Pa06:61,505,030–61,508,434
genomic location
Record overview

Feature identity

Identifier
Pa06g3210
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
3,405 bp
Genomic location
Pa06:61,505,030–61,508,434
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: CCNB2 | Seed ortholog: 337451.A0A3S3NQM6 | COG: S | eggNOG OG: Cyclin_C@131567|HJ-12, Cyclin_C@2759|Nh-14, Cyclin_C@33090|Adi-22, Cyclin_C@3398|ApJ-23, Cyclin_N@131567|CM-9, Cyclin_N@2759|mM-18, Cyclin_N@3398|FUD-33
Gene Ontology
GO:0000082 G1/S transition of mitotic cell cycle; GO:0000086 G2/M transition of mitotic cell cycle; GO:0000278 mitotic cell cycle; GO:0000281 mitotic cytokinesis; GO:0001556 oocyte maturation; GO:0001558 regulation of cell growth; GO:0001700 embryonic development via the syncytial blastoderm; GO:0001701 in utero embryonic development; GO:0001933 negative regulation of protein phosphorylation; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006279 premeiotic DNA replication; GO:0006355 regulation of DNA-templated transcription; GO:0006468 protein phosphorylation; GO:0006974 DNA damage response; GO:0007052 mitotic spindle organization; GO:0007057 spindle assembly involved in female meiosis I; GO:0007079 mitotic chromosome movement towards spindle pole; GO:0007080 mitotic metaphase chromosome alignment; GO:0007089 traversing start control point of mitotic cell cycle; GO:0007131 reciprocal meiotic recombination; GO:0007135 meiosis II; GO:0007283 spermatogenesis; GO:0007346 regulation of mitotic cell cycle; GO:0008150 biological_process; GO:0008315 G2/MI transition of meiotic cell cycle; GO:0008595 anterior/posterior axis specification, embryo; GO:0008608 attachment of spindle microtubules to kinetochore; GO:0009410 response to xenobiotic stimulus; GO:0009612 response to mechanical stimulus; GO:0009636 response to toxic substance; GO:0010332 response to gamma radiation; GO:0010389 regulation of G2/M transition of mitotic cell cycle; GO:0010520 regulation of reciprocal meiotic recombination; GO:0010629 negative regulation of gene expression; GO:0010696 positive regulation of mitotic spindle pole body separation; GO:0010971 positive regulation of G2/M transition of mitotic cell cycle; GO:0023052 signaling; GO:0030447 filamentous growth; GO:0031138 negative regulation of conjugation with cellular fusion; GO:0031442 positive regulation of mRNA 3'-end processing; GO:0031568 mitotic G1 cell size control checkpoint signaling; GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process; GO:0032880 regulation of protein localization; GO:0032888 regulation of mitotic spindle elongation; GO:0033260 nuclear DNA replication; GO:0035186 syncytial blastoderm mitotic cell cycle; GO:0040008 regulation of growth; GO:0042246 tissue regeneration; GO:0043029 T cell homeostasis; GO:0044773 mitotic DNA damage checkpoint signaling; GO:0045740 positive regulation of DNA replication; GO:0045787 positive regulation of cell cycle; GO:0045860 positive regulation of protein kinase activity; GO:0045931 positive regulation of mitotic cell cycle; GO:0046680 response to DDT; GO:0048134 germ-line cyst formation; GO:0048137 spermatocyte division; GO:0048146 positive regulation of fibroblast proliferation; GO:0048538 thymus development; GO:0048565 digestive tract development; GO:0051321 meiotic cell cycle; GO:0051445 regulation of meiotic cell cycle; GO:0051447 negative regulation of meiotic cell cycle; GO:0051592 response to calcium ion; GO:0051726 regulation of cell cycle; GO:0051987 positive regulation of attachment of spindle microtubules to kinetochore; GO:0055015 ventricular cardiac muscle cell development; GO:0060045 positive regulation of cardiac muscle cell proliferation; GO:0060317 cardiac epithelial to mesenchymal transition; GO:0060623 regulation of chromosome condensation; GO:0060631 regulation of meiosis I; GO:0061842 microtubule organizing center localization; GO:0061952 midbody abscission; GO:0065003 protein-containing complex assembly; GO:0071283 cellular response to iron(III) ion; GO:0071398 cellular response to fatty acid; GO:0071456 cellular response to hypoxia; GO:0071466 cellular response to xenobiotic stimulus; GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint; GO:0090307 mitotic spindle assembly; GO:0110044 regulation of cell cycle switching, mitotic to meiotic cell cycle; GO:0140013 meiotic nuclear division; GO:0140429 positive regulation of mitotic sister chromatid biorientation; GO:1900087 positive regulation of G1/S transition of mitotic cell cycle; GO:1901673 regulation of mitotic spindle assembly; GO:1901993 regulation of meiotic cell cycle phase transition; GO:1904145 negative regulation of meiotic cell cycle process involved in oocyte maturation; GO:1905263 positive regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination; GO:1905448 positive regulation of mitochondrial ATP synthesis coupled electron transport; GO:2000045 regulation of G1/S transition of mitotic cell cycle
KEGG
KO: K21777 | Pathway: 04011, 04068, 04110, 04111, 04113, 04114, 04115, 04218, 04914, 05166, 05170 | BRITE: 00001, 03032, 03036
Biological context

Connected feature records

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