Feature identity
- Identifier
- PaHa06g03080.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,147 bp
- Genomic location
- 6:4,505,622–4,514,586
- Strand
- −
Hass · mRNA
PaHa06g03080.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,147
- bp
- 6:4,505,622–4,514,586
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g03080
- eggNOG
- Preferred name: NLP7 | Seed ortholog: 337451.A0A443PFK5 | COG: S | eggNOG OG: PB1@131567|A-1*, PB1@2759|Al-8!, PB1@3193|km-21, PB1@3398|sR-22, RWP-RK@131567|Fy-13, RWP-RK@33090|YN-24, RWP-RK@3398|el-27
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0001216 DNA-binding transcription activator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0010118 stomatal movement; GO:0010167 response to nitrate; GO:0042128 nitrate assimilation
- KEGG
- KO: K13422 | Pathway: 04016, 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g03080.1-protein
derives_frommRNAPaHa06g03080.1
mRNAPaHa06g03080.1
part_ofgenePaHa06g03080
CDS
part_ofPaHa06g03080.1-CDS-6-1787993825:4505622..4505680mRNAPaHa06g03080.1
CDS
part_ofPaHa06g03080.1-CDS-6-1787993825:4505741..4505782mRNAPaHa06g03080.1
CDS
part_ofPaHa06g03080.1-CDS-6-1787993825:4505894..4506961mRNAPaHa06g03080.1
CDS
part_ofPaHa06g03080.1-CDS-6-1787993825:4507818..4508784mRNAPaHa06g03080.1
CDS
part_ofPaHa06g03080.1-CDS-6-1787993825:4508879..4508926mRNAPaHa06g03080.1
CDS
part_ofPaHa06g03080.1-CDS-6-1787993825:4511486..4512060mRNAPaHa06g03080.1
CDS
part_ofPaHa06g03080.1-CDS-6-1787993825:4514199..4514586mRNAPaHa06g03080.1
exon
part_ofPaHa06g03080.1-exon-6-1787993825:4505622..4505680mRNAPaHa06g03080.1
exon
part_ofPaHa06g03080.1-exon-6-1787993825:4505741..4505782mRNAPaHa06g03080.1
exon
part_ofPaHa06g03080.1-exon-6-1787993825:4505894..4506961mRNAPaHa06g03080.1
exon
part_ofPaHa06g03080.1-exon-6-1787993825:4507818..4508784mRNAPaHa06g03080.1
exon
part_ofPaHa06g03080.1-exon-6-1787993825:4508879..4508926mRNAPaHa06g03080.1
exon
part_ofPaHa06g03080.1-exon-6-1787993825:4511486..4512060mRNAPaHa06g03080.1
exon
part_ofPaHa06g03080.1-exon-6-1787993825:4514199..4514586mRNAPaHa06g03080.1
