West Indian T2T · gene

Pa09g0558

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

6,301
bp
Pa09:9,265,625–9,271,925
genomic location
Record overview

Feature identity

Identifier
Pa09g0558
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
6,301 bp
Genomic location
Pa09:9,265,625–9,271,925
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC104217691 | Seed ortholog: 337451.A0A443PVJ7 | COG: S | eggNOG OG: AMP-binding_C@131567|Drk-31, AMP-binding_C@3193|TGo-46, AMP-binding_C@3398|gGS-52, AMP-binding_C@35493|Ock-43, AMP-binding|MQMKUE@131567, AMP-binding|MQMKUE@3398
Gene Ontology
GO:0005575 cellular_component; GO:0005777 peroxisome; GO:0016207 4-coumarate-CoA ligase activity; GO:0016874 ligase activity; GO:0031956 medium-chain fatty acid-CoA ligase activity; GO:1904070 ascaroside biosynthetic process
KEGG
EC: ec:6.2.1.12 | KO: K10526 | Pathway: 00592, 01100, 01110 | Module: M00113 | BRITE: 00001
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.