West Indian T2T · gene

Pa09g1797

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

912
bp
Pa09:42,258,307–42,259,218
genomic location
Record overview

Feature identity

Identifier
Pa09g1797
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
912 bp
Genomic location
Pa09:42,258,307–42,259,218
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC104601481 | Seed ortholog: 337451.A0A3S3R562 | COG: S | eggNOG OG: SAM_2@131567|Km-15, SAM_2@2759|cv-19
Gene Ontology
GO:0000196 cell integrity MAPK cascade; GO:0000278 mitotic cell cycle; GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening; GO:0000932 P-body; GO:0000956 nuclear-transcribed mRNA catabolic process; GO:0001402 signal transduction involved in filamentous growth; GO:0001403 invasive growth in response to glucose limitation; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0004143 ATP-dependent diacylglycerol kinase activity; GO:0004672 protein kinase activity; GO:0004709 MAP kinase kinase kinase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005768 endosome; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005905 clathrin-coated pit; GO:0006468 protein phosphorylation; GO:0006654 phosphatidic acid biosynthetic process; GO:0007124 pseudohyphal growth; GO:0007165 signal transduction; GO:0007232 osmosensory signaling pathway via Sho1 osmosensor; GO:0007343 egg activation; GO:0007346 regulation of mitotic cell cycle; GO:0008156 negative regulation of DNA replication; GO:0015629 actin cytoskeleton; GO:0019900 kinase binding; GO:0019992 diacylglycerol binding; GO:0030168 platelet activation; GO:0031139 positive regulation of conjugation with cellular fusion; GO:0031410 cytoplasmic vesicle; GO:0032093 SAM domain binding; GO:0032991 protein-containing complex; GO:0038066 p38MAPK cascade; GO:0042802 identical protein binding; GO:0042803 protein homodimerization activity; GO:0043539 protein serine/threonine kinase activator activity; GO:0044010 single-species biofilm formation; GO:0045742 positive regulation of epidermal growth factor receptor signaling pathway; GO:0046339 diacylglycerol metabolic process; GO:0046340 diacylglycerol catabolic process; GO:0046473 phosphatidic acid metabolic process; GO:0046834 lipid phosphorylation; GO:0046982 protein heterodimerization activity; GO:0051054 positive regulation of DNA metabolic process; GO:0051726 regulation of cell cycle; GO:0070336 flap-structured DNA binding; GO:0071474 cellular hyperosmotic response; GO:0071507 pheromone response MAPK cascade; GO:0106310 protein serine kinase activity; GO:0141212 phospholipase C/protein kinase C signal transduction; GO:0160195 negative regulation of phospholipase C/protein kinase C signal transduction; GO:1902648 positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process; GO:1902911 protein kinase complex; GO:2000370 positive regulation of clathrin-dependent endocytosis
KEGG
EC: ec:2.7.1.107, ec:2.7.11.25 | KO: K00901, K11228, K27407 | Pathway: 00561, 00564, 01100, 04011, 04070, 04072, 05231 | BRITE: 00001, 01000, 01001, 03019, 04131
Biological context

Connected feature records

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