West Indian T2T · gene

Pa10g0341

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

38,093
bp
Pa10:6,974,035–7,012,127
genomic location
Record overview

Feature identity

Identifier
Pa10g0341
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
38,093 bp
Genomic location
Pa10:6,974,035–7,012,127
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: DRP1B | Seed ortholog: 4432.A0A1U8AKL3 | COG: S | eggNOG OG: Dynamin_M@131567|A-1*, Dynamin_M@2759|LP-15, Dynamin_M@3398|ARz-23, Dynamin_M@35493|nc-20, Dynamin_N@131567|Le-12, Dynamin_N@2759|DVx-31!, Dynamin_N@3398|InW-46, Dynamin_N@35493|Hrc-43, GED@131567|A-1*, GED@2759|O-4!, GED@3193|HQ-12, GED@33090|Bd-9, GED@3398|Qj-15
Gene Ontology
GO:0000001 mitochondrion inheritance; GO:0000045 autophagosome assembly; GO:0000086 G2/M transition of mitotic cell cycle; GO:0000266 mitochondrial fission; GO:0000727 double-strand break repair via break-induced replication; GO:0002031 G protein-coupled receptor internalization; GO:0003281 ventricular septum development; GO:0003924 GTPase activity; GO:0005737 cytoplasm; GO:0005856 cytoskeleton; GO:0006355 regulation of DNA-templated transcription; GO:0006623 protein targeting to vacuole; GO:0006816 calcium ion transport; GO:0006892 post-Golgi vesicle-mediated transport; GO:0006893 Golgi to plasma membrane transport; GO:0006896 Golgi to vacuole transport; GO:0006897 endocytosis; GO:0006898 receptor-mediated endocytosis; GO:0006907 pinocytosis; GO:0006909 phagocytosis; GO:0006914 autophagy; GO:0006915 apoptotic process; GO:0006997 nucleus organization; GO:0007005 mitochondrion organization; GO:0007015 actin filament organization; GO:0007031 peroxisome organization; GO:0007032 endosome organization; GO:0007033 vacuole organization; GO:0007034 vacuolar transport; GO:0007098 centrosome cycle; GO:0007163 establishment or maintenance of cell polarity; GO:0007165 signal transduction; GO:0007283 spermatogenesis; GO:0007370 ventral furrow formation; GO:0007416 synapse assembly; GO:0008150 biological_process; GO:0008637 apoptotic mitochondrial changes; GO:0009416 response to light stimulus; GO:0009524 phragmoplast; GO:0009617 response to bacterium; GO:0009792 embryo development ending in birth or egg hatching; GO:0010468 regulation of gene expression; GO:0010592 positive regulation of lamellipodium assembly; GO:0010637 negative regulation of mitochondrial fusion; GO:0010821 regulation of mitochondrion organization; GO:0015886 heme transport; GO:0016050 vesicle organization; GO:0016236 macroautophagy; GO:0016559 peroxisome fission; GO:0019886 antigen processing and presentation of exogenous peptide antigen via MHC class II; GO:0030036 actin cytoskeleton organization; GO:0030382 sperm mitochondrion organization; GO:0030447 filamentous growth; GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway; GO:0030516 regulation of axon extension; GO:0031288 sorocarp morphogenesis; GO:0031589 cell-substrate adhesion; GO:0031623 receptor internalization; GO:0033572 transferrin transport; GO:0034497 protein localization to phagophore assembly site; GO:0034643 establishment of mitochondrion localization, microtubule-mediated; GO:0034976 response to endoplasmic reticulum stress; GO:0035020 regulation of Rac protein signal transduction; GO:0035170 lymph gland crystal cell differentiation; GO:0035904 aorta development; GO:0036466 synaptic vesicle recycling via endosome; GO:0040011 locomotion; GO:0042144 vacuole fusion, non-autophagic; GO:0042220 response to cocaine; GO:0042713 sperm ejaculation; GO:0043009 chordate embryonic development; GO:0043065 positive regulation of apoptotic process; GO:0043149 stress fiber assembly; GO:0043653 mitochondrial fragmentation involved in apoptotic process; GO:0044011 single-species biofilm formation on inanimate substrate; GO:0044182 filamentous growth of a population of unicellular organisms; GO:0044351 macropinocytosis; GO:0044375 regulation of peroxisome size; GO:0044656 regulation of post-lysosomal vacuole size; GO:0045053 protein retention in Golgi apparatus; GO:0045429 positive regulation of nitric oxide biosynthetic process; GO:0045807 positive regulation of endocytosis; GO:0045893 positive regulation of DNA-templated transcription; GO:0045920 negative regulation of exocytosis; GO:0046847 filopodium assembly; GO:0048312 intracellular distribution of mitochondria; GO:0048488 synaptic vesicle endocytosis; GO:0048489 synaptic vesicle transport; GO:0048742 regulation of skeletal muscle fiber development; GO:0048766 root hair initiation; GO:0048812 neuron projection morphogenesis; GO:0050714 positive regulation of protein secretion; GO:0050766 positive regulation of phagocytosis; GO:0050804 modulation of chemical synaptic transmission; GO:0051017 actin filament bundle assembly; GO:0051258 protein polymerization; GO:0051259 protein complex oligomerization; GO:0051260 protein homooligomerization; GO:0051289 protein homotetramerization; GO:0051491 positive regulation of filopodium assembly; GO:0051646 mitochondrion localization; GO:0060026 convergent extension; GO:0060047 heart contraction; GO:0060151 peroxisome localization; GO:0060976 coronary vasculature development; GO:0060988 lipid tube assembly; GO:0061001 regulation of dendritic spine morphogenesis; GO:0061002 negative regulation of dendritic spine morphogenesis; GO:0061003 positive regulation of dendritic spine morphogenesis; GO:0061024 membrane organization; GO:0061053 somite development; GO:0061061 muscle structure development; GO:0061572 actin filament bundle organization; GO:0061952 midbody abscission; GO:0070266 necroptotic process; GO:0070585 protein localization to mitochondrion; GO:0071245 cellular response to carbon monoxide; GO:0071396 cellular response to lipid; GO:0071456 cellular response to hypoxia; GO:0071476 cellular hypotonic response; GO:0071481 cellular response to X-ray; GO:0071732 cellular response to nitric oxide; GO:0072583 clathrin-dependent endocytosis; GO:0090023 positive regulation of neutrophil chemotaxis; GO:0090140 regulation of mitochondrial fission; GO:0090141 positive regulation of mitochondrial fission; GO:0090148 membrane fission; GO:0090149 mitochondrial membrane fission; GO:0090383 phagosome acidification; GO:0090386 phagosome maturation involved in apoptotic cell clearance; GO:0090601 enucleation; GO:0097494 regulation of vesicle size; GO:0097749 membrane tubulation; GO:0097753 membrane bending; GO:0098609 cell-cell adhesion; GO:0099049 clathrin coat assembly involved in endocytosis; GO:0099050 vesicle scission; GO:0099525 presynaptic dense core vesicle exocytosis; GO:0140239 postsynaptic endocytosis; GO:0140572 vacuole fission; GO:0160040 mitocytosis; GO:1900026 positive regulation of substrate adhesion-dependent cell spreading; GO:1900063 regulation of peroxisome organization; GO:1900242 regulation of synaptic vesicle endocytosis; GO:1900244 positive regulation of synaptic vesicle endocytosis; GO:1900756 protein processing in phagocytic vesicle; GO:1901524 regulation of mitophagy; GO:1902856 negative regulation of non-motile cilium assembly; GO:1903351 cellular response to dopamine; GO:1903358 regulation of Golgi organization; GO:1903408 positive regulation of P-type sodium:potassium-exchanging transporter activity; GO:1903423 positive regulation of synaptic vesicle recycling; GO:1903526 negative regulation of membrane tubulation; GO:1903578 regulation of ATP metabolic process; GO:1904645 response to amyloid-beta; GO:1904666 regulation of ubiquitin protein ligase activity; GO:1905345 protein localization to cleavage furrow; GO:1905395 response to flavonoid; GO:1990910 response to hypobaric hypoxia; GO:2000114 regulation of establishment of cell polarity; GO:2000302 positive regulation of synaptic vesicle exocytosis; GO:2000370 positive regulation of clathrin-dependent endocytosis
KEGG
EC: ec:3.6.5.5 | KO: K27686 | Pathway: 04072, 04139, 04144, 04214, 04217, 04621, 04666, 04668, 04721, 04961, 05100, 05132 | BRITE: 00001, 04131
Biological context

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