West Indian T2T · gene

Pa10g1032

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,177
bp
Pa10:30,634,970–30,637,146
genomic location
Record overview

Feature identity

Identifier
Pa10g1032
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
2,177 bp
Genomic location
Pa10:30,634,970–30,637,146
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC107922983 | Seed ortholog: 337451.A0A3S3PLW6 | COG: S | eggNOG OG: PBP@131567|A-1, PBP@2759|J-4!, PBP@3193|DB-10, PBP@58023|NU-14
Gene Ontology
GO:0000165 MAPK cascade; GO:0000328 fungal-type vacuole lumen; GO:0000329 fungal-type vacuole membrane; GO:0001933 negative regulation of protein phosphorylation; GO:0002026 regulation of the force of heart contraction; GO:0002759 regulation of antimicrobial humoral response; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0003735 structural constituent of ribosome; GO:0005102 signaling receptor binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005543 phospholipid binding; GO:0005575 cellular_component; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005741 mitochondrial outer membrane; GO:0005743 mitochondrial inner membrane; GO:0005762 mitochondrial large ribosomal subunit; GO:0005829 cytosol; GO:0006979 response to oxidative stress; GO:0007286 spermatid development; GO:0007320 insemination; GO:0008021 synaptic vesicle; GO:0008150 biological_process; GO:0008289 lipid binding; GO:0008429 phosphatidylethanolamine binding; GO:0009410 response to xenobiotic stimulus; GO:0009617 response to bacterium; GO:0009636 response to toxic substance; GO:0009986 cell surface; GO:0014823 response to activity; GO:0019210 kinase inhibitor activity; GO:0019887 protein kinase regulator activity; GO:0019899 enzyme binding; GO:0019900 kinase binding; GO:0019901 protein kinase binding; GO:0021766 hippocampus development; GO:0030162 regulation of proteolysis; GO:0030414 peptidase inhibitor activity; GO:0032543 mitochondrial translation; GO:0033612 receptor serine/threonine kinase binding; GO:0033617 mitochondrial respiratory chain complex IV assembly; GO:0035556 intracellular signal transduction; GO:0042755 eating behavior; GO:0043025 neuronal cell body; GO:0043168 anion binding; GO:0043209 myelin sheath; GO:0043409 negative regulation of MAPK cascade; GO:0043679 axon terminus; GO:0045177 apical part of cell; GO:0045471 response to ethanol; GO:0045840 positive regulation of mitotic nuclear division; GO:0046578 regulation of Ras protein signal transduction; GO:0048240 sperm capacitation; GO:0050829 defense response to Gram-negative bacterium; GO:0050830 defense response to Gram-positive bacterium; GO:0051019 mitogen-activated protein kinase binding; GO:0051412 response to corticosterone; GO:0051591 response to cAMP; GO:0051592 response to calcium ion; GO:0051602 response to electrical stimulus; GO:0060409 positive regulation of acetylcholine metabolic process; GO:0062040 fungal biofilm matrix; GO:0070062 extracellular exosome; GO:0070373 negative regulation of ERK1 and ERK2 cascade; GO:0141163 positive regulation of cAMP/PKA signal transduction; GO:1905923 positive regulation of acetylcholine biosynthetic process
KEGG
KO: K06910 | BRITE: 00001, 01002
Biological context

Connected feature records

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