West Indian T2T · gene

Pa10g1624

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

6,104
bp
Pa10:40,847,984–40,854,087
genomic location
Record overview

Feature identity

Identifier
Pa10g1624
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
6,104 bp
Genomic location
Pa10:40,847,984–40,854,087
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: GRXC1 | Seed ortholog: 337451.A0A443PTB7 | COG: S | eggNOG OG: Glutaredoxin@131567|Lr-14, Glutaredoxin@2759|AIz-21!, Glutaredoxin@58023|Fyx-34
Gene Ontology
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000902 cell morphogenesis; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005783 endoplasmic reticulum; GO:0005829 cytosol; GO:0006749 glutathione metabolic process; GO:0006979 response to oxidative stress; GO:0006995 cellular response to nitrogen starvation; GO:0008150 biological_process; GO:0009408 response to heat; GO:0009735 response to cytokinin; GO:0009751 response to salicylic acid; GO:0009863 salicylic acid mediated signaling pathway; GO:0009867 jasmonic acid mediated signaling pathway; GO:0010167 response to nitrate; GO:0010731 protein glutathionylation; GO:0016226 iron-sulfur cluster assembly; GO:0016491 oxidoreductase activity; GO:0031154 culmination involved in sorocarp development; GO:0034599 cellular response to oxidative stress; GO:0042802 identical protein binding; GO:0045454 cell redox homeostasis; GO:0045892 negative regulation of DNA-templated transcription; GO:0048441 petal development; GO:0048448 stamen morphogenesis; GO:0048451 petal formation; GO:0050832 defense response to fungus; GO:0080183 response to photooxidative stress; GO:1900034 regulation of cellular response to heat
KEGG
KO: K03676 | BRITE: 00001, 03110
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.