Feature identity
- Identifier
- PaHa06g11950.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,431 bp
- Genomic location
- 6:19,491,361–19,492,791
- Strand
- −
Hass · mRNA
PaHa06g11950.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,431
- bp
- 6:19,491,361–19,492,791
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g11950
- eggNOG
- Preferred name: LOC104604676 | Seed ortholog: 337451.A0A443PDS3 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@1437183|JqB-34, HLH@3193|DyL-28, HLH@33090|AAF-17, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@1437183|AQT-28, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|AFW-24, bHLH-MYC_N@33090|Y-5
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0010629 negative regulation of gene expression
- KEGG
- KO: K13422 | Pathway: 04016, 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g11950.1-protein
derives_frommRNAPaHa06g11950.1
mRNAPaHa06g11950.1
part_ofgenePaHa06g11950
CDS
part_ofPaHa06g11950.1-CDS-6-1787993825:19491361..19492791mRNAPaHa06g11950.1
exon
part_ofPaHa06g11950.1-exon-6-1787993825:19491361..19492791mRNAPaHa06g11950.1
