West Indian T2T · gene

Pa12g2175

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

6,794
bp
Pa12:45,424,745–45,431,538
genomic location
Record overview

Feature identity

Identifier
Pa12g2175
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
6,794 bp
Genomic location
Pa12:45,424,745–45,431,538
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC100841320 | Seed ortholog: 4432.A0A1U8AFX3 | COG: COG0750 | eggNOG OG: Peptidase_M50@131567|C-2!
Gene Ontology
GO:0000139 Golgi membrane; GO:0004222 metalloendopeptidase activity; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005789 endoplasmic reticulum membrane; GO:0006508 proteolysis; GO:0006607 NLS-bearing protein import into nucleus; GO:0006629 lipid metabolic process; GO:0007095 mitotic G2 DNA damage checkpoint signaling; GO:0008203 cholesterol metabolic process; GO:0009651 response to salt stress; GO:0016020 membrane; GO:0030968 endoplasmic reticulum unfolded protein response; GO:0031293 membrane protein intracellular domain proteolysis; GO:0034976 response to endoplasmic reticulum stress; GO:0036500 ATF6-mediated unfolded protein response; GO:0045540 regulation of cholesterol biosynthetic process; GO:0045542 positive regulation of cholesterol biosynthetic process; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0051216 cartilage development; GO:0051604 protein maturation; GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding; GO:0070977 bone maturation; GO:0071475 cellular hyperosmotic salinity response; GO:0140537 transcription regulator activator activity; GO:1900457 regulation of brassinosteroid mediated signaling pathway; GO:1905897 regulation of response to endoplasmic reticulum stress
KEGG
EC: ec:3.4.24.85 | KO: K07765 | Pathway: 04141 | BRITE: 00001, 01000, 01002
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.