Feature identity
- Identifier
- Pa12g2320.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,212 bp
- Genomic location
- Pa12:47,343,568–47,347,722
- Strand
- +
West Indian T2T · mRNA
Pa12g2320.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,212
- bp
- Pa12:47,343,568–47,347,722
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa12g2320
- eggNOG
- Preferred name: PED1 | Seed ortholog: 337451.A0A443PZB7 | COG: COG0183 | eggNOG OG: Thiolase_C@131567|Tu-17, Thiolase_C@3398|GFJ-34, Thiolase_N@131567|Mj-14, Thiolase_N@3398|ILG-32
- Gene Ontology
- GO:0000325 plant-type vacuole; GO:0003988 acetyl-CoA C-acyltransferase activity; GO:0005515 protein binding; GO:0005730 nucleolus; GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0005783 endoplasmic reticulum; GO:0006635 fatty acid beta-oxidation; GO:0009507 chloroplast; GO:0009514 glyoxysome; GO:0009611 response to wounding; GO:0009695 jasmonic acid biosynthetic process; GO:0009789 positive regulation of abscisic acid-activated signaling pathway; GO:0010111 glyoxysome organization
- KEGG
- EC: ec:2.3.1.16 | KO: K07513 | Pathway: 00071, 00280, 00592, 01040, 01100, 01110, 01212, 04146 | Module: M00087, M00113, M00861 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa12g2320.2-protein
derives_frommRNAPa12g2320.2
exon
part_ofPa12g2320.1:1mRNAPa12g2320.2
exon
part_ofPa12g2320.1:2mRNAPa12g2320.2
exon
part_ofPa12g2320.1:3mRNAPa12g2320.2
exon
part_ofPa12g2320.1:4mRNAPa12g2320.2
mRNAPa12g2320.2
part_ofgenePa12g2320
exon
part_ofPa12g2320.2:10mRNAPa12g2320.2
exon
part_ofPa12g2320.2:11mRNAPa12g2320.2
exon
part_ofPa12g2320.2:12mRNAPa12g2320.2
exon
part_ofPa12g2320.2:13mRNAPa12g2320.2
exon
part_ofPa12g2320.2:14mRNAPa12g2320.2
exon
part_ofPa12g2320.2:15mRNAPa12g2320.2
exon
part_ofPa12g2320.2:16mRNAPa12g2320.2
exon
part_ofPa12g2320.2:17mRNAPa12g2320.2
exon
part_ofPa12g2320.2:6mRNAPa12g2320.2
exon
part_ofPa12g2320.2:7mRNAPa12g2320.2
exon
part_ofPa12g2320.2:8mRNAPa12g2320.2
exon
part_ofPa12g2320.2:9mRNAPa12g2320.2
CDS
part_ofPa12g2320.2:cdsmRNAPa12g2320.2
