Feature identity
- Identifier
- PaHa01g19900.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 855 bp
- Genomic location
- 1:35,847,506–35,849,058
- Strand
- +
Hass · mRNA
PaHa01g19900.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 855
- bp
- 1:35,847,506–35,849,058
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g19900
- eggNOG
- Preferred name: LOC110785696 | Seed ortholog: 337451.A0A443N7I3 | COG: S | eggNOG OG: TCP@131221|AC-7, TCP@131567|A-1*, TCP@2759|G-3, TCP@3193|DK-11, TCP@3398|Fm-13
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008361 regulation of cell size; GO:0009653 anatomical structure morphogenesis; GO:0043565 sequence-specific DNA binding; GO:1900056 negative regulation of leaf senescence
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g19900.1-protein
derives_frommRNAPaHa01g19900.1
mRNAPaHa01g19900.1
part_ofgenePaHa01g19900
CDS
part_ofPaHa01g19900.1-CDS-1-1787993825:35847506..35848321mRNAPaHa01g19900.1
CDS
part_ofPaHa01g19900.1-CDS-1-1787993825:35848928..35848956mRNAPaHa01g19900.1
CDS
part_ofPaHa01g19900.1-CDS-1-1787993825:35849049..35849058mRNAPaHa01g19900.1
exon
part_ofPaHa01g19900.1-exon-1-1787993825:35847506..35848321mRNAPaHa01g19900.1
exon
part_ofPaHa01g19900.1-exon-1-1787993825:35848928..35848956mRNAPaHa01g19900.1
exon
part_ofPaHa01g19900.1-exon-1-1787993825:35849049..35849058mRNAPaHa01g19900.1
