Feature identity
- Identifier
- Pa12g1378.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 984 bp
- Genomic location
- Pa12:33,257,002–33,264,870
- Strand
- −
West Indian T2T · mRNA
Pa12g1378.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 984
- bp
- Pa12:33,257,002–33,264,870
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa12g1378
- eggNOG
- Preferred name: LOC104598254 | Seed ortholog: 337451.A0A443Q192 | COG: COG0300 | eggNOG OG: adh_short@131567|Cbi-30
- Gene Ontology
- GO:0004090 carbonyl reductase (NADPH) activity; GO:0005515 protein binding; GO:0005789 endoplasmic reticulum membrane; GO:0016020 membrane; GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0052650 all-trans-retinol dehydrogenase (NADP+) activity
- KEGG
- KO: K11165 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa12g1378.1-protein
derives_frommRNAPa12g1378.1
mRNAPa12g1378.1
part_ofgenePa12g1378
exon
part_ofPa12g1378.1:1mRNAPa12g1378.1
exon
part_ofPa12g1378.1:10mRNAPa12g1378.1
exon
part_ofPa12g1378.1:11mRNAPa12g1378.1
exon
part_ofPa12g1378.1:12mRNAPa12g1378.1
exon
part_ofPa12g1378.1:2mRNAPa12g1378.1
exon
part_ofPa12g1378.1:3mRNAPa12g1378.1
exon
part_ofPa12g1378.1:4mRNAPa12g1378.1
exon
part_ofPa12g1378.1:5mRNAPa12g1378.1
exon
part_ofPa12g1378.1:6mRNAPa12g1378.1
exon
part_ofPa12g1378.1:7mRNAPa12g1378.1
exon
part_ofPa12g1378.1:8mRNAPa12g1378.1
exon
part_ofPa12g1378.1:9mRNAPa12g1378.1
CDS
part_ofPa12g1378.1:cdsmRNAPa12g1378.1
