Feature identity
- Identifier
- Pa12g1325.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 483 bp
- Genomic location
- Pa12:32,116,734–32,122,011
- Strand
- +
West Indian T2T · mRNA
Pa12g1325.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 483
- bp
- Pa12:32,116,734–32,122,011
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa12g1325
- eggNOG
- Preferred name: LOC110785410 | Seed ortholog: 542762.A0A4S4DFK0 | COG: S | eggNOG OG: Sep15_SelM@131567|A-1*, Sep15_SelM@2759|C-2
- Gene Ontology
- GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005783 endoplasmic reticulum; GO:0005788 endoplasmic reticulum lumen; GO:0008150 biological_process; GO:0008379 thioredoxin peroxidase activity; GO:0008430 selenium binding; GO:0012505 endomembrane system; GO:0015038 glutathione disulfide oxidoreductase activity; GO:0032496 response to lipopolysaccharide; GO:0035092 sperm DNA condensation; GO:0045454 cell redox homeostasis; GO:0051084 'de novo' post-translational protein folding
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa12g1325.2-protein
derives_frommRNAPa12g1325.2
exon
part_ofPa12g1325.1:3mRNAPa12g1325.2
exon
part_ofPa12g1325.1:4mRNAPa12g1325.2
exon
part_ofPa12g1325.1:5mRNAPa12g1325.2
mRNAPa12g1325.2
part_ofgenePa12g1325
exon
part_ofPa12g1325.2:6mRNAPa12g1325.2
CDS
part_ofPa12g1325.2:cdsmRNAPa12g1325.2
