Feature identity
- Identifier
- Pa11g1256.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 933 bp
- Genomic location
- Pa11:38,847,889–38,884,203
- Strand
- −
West Indian T2T · mRNA
Pa11g1256.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 933
- bp
- Pa11:38,847,889–38,884,203
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa11g1256
- eggNOG
- Preferred name: LOC104603702 | Seed ortholog: 337451.A0A3S3NCG9 | COG: COG2030 | eggNOG OG: MaoC_dehydratas@131567|vZ-23
- Gene Ontology
- GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0006635 fatty acid beta-oxidation; GO:0018812 3-hydroxyacyl-CoA dehydratase activity
- KEGG
- EC: ec:4.2.1.119 | KO: K19658 | Pathway: 00120, 00410, 00640, 01040, 01100, 01200, 01212, 04146 | Module: M00013, M00104, M00861, M00862 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa11g1256.1-protein
derives_frommRNAPa11g1256.1
mRNAPa11g1256.1
part_ofgenePa11g1256
exon
part_ofPa11g1256.1:1mRNAPa11g1256.1
exon
part_ofPa11g1256.1:10mRNAPa11g1256.1
exon
part_ofPa11g1256.1:11mRNAPa11g1256.1
exon
part_ofPa11g1256.1:2mRNAPa11g1256.1
exon
part_ofPa11g1256.1:3mRNAPa11g1256.1
exon
part_ofPa11g1256.1:4mRNAPa11g1256.1
exon
part_ofPa11g1256.1:5mRNAPa11g1256.1
exon
part_ofPa11g1256.1:6mRNAPa11g1256.1
exon
part_ofPa11g1256.1:7mRNAPa11g1256.1
exon
part_ofPa11g1256.1:8mRNAPa11g1256.1
exon
part_ofPa11g1256.1:9mRNAPa11g1256.1
CDS
part_ofPa11g1256.1:cdsmRNAPa11g1256.1
