Feature identity
- Identifier
- PaHa06g19820.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 990 bp
- Genomic location
- 6:52,056,462–52,071,442
- Strand
- −
Hass · mRNA
PaHa06g19820.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 990
- bp
- 6:52,056,462–52,071,442
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g19820
- eggNOG
- Preferred name: LOC100828257 | Seed ortholog: 337451.A0A443PCB6 | COG: COG3040 | eggNOG OG: Lipocalin_2@131567|A-1
- Gene Ontology
- GO:0005576 extracellular region; GO:0005829 cytosol; GO:0006979 response to oxidative stress; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0009507 chloroplast; GO:0009535 chloroplast thylakoid membrane; GO:0009644 response to high light intensity; GO:0009737 response to abscisic acid; GO:0010117 photoprotection; GO:0010431 seed maturation; GO:0031977 thylakoid lumen; GO:0046322 negative regulation of fatty acid oxidation; GO:1901562 response to paraquat
- KEGG
- KO: K03098 | BRITE: 00001, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g19820.1-protein
derives_frommRNAPaHa06g19820.1
mRNAPaHa06g19820.1
part_ofgenePaHa06g19820
CDS
part_ofPaHa06g19820.1-CDS-6-1787993825:52056462..52056740mRNAPaHa06g19820.1
CDS
part_ofPaHa06g19820.1-CDS-6-1787993825:52057560..52057850mRNAPaHa06g19820.1
CDS
part_ofPaHa06g19820.1-CDS-6-1787993825:52068351..52068587mRNAPaHa06g19820.1
CDS
part_ofPaHa06g19820.1-CDS-6-1787993825:52070143..52070278mRNAPaHa06g19820.1
CDS
part_ofPaHa06g19820.1-CDS-6-1787993825:52071396..52071442mRNAPaHa06g19820.1
exon
part_ofPaHa06g19820.1-exon-6-1787993825:52056462..52056740mRNAPaHa06g19820.1
exon
part_ofPaHa06g19820.1-exon-6-1787993825:52057560..52057850mRNAPaHa06g19820.1
exon
part_ofPaHa06g19820.1-exon-6-1787993825:52068351..52068587mRNAPaHa06g19820.1
exon
part_ofPaHa06g19820.1-exon-6-1787993825:52070143..52070278mRNAPaHa06g19820.1
exon
part_ofPaHa06g19820.1-exon-6-1787993825:52071396..52071442mRNAPaHa06g19820.1
