Feature identity
- Identifier
- PaHa06g20750.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,332 bp
- Genomic location
- 6:54,302,316–54,310,054
- Strand
- −
Hass · mRNA
PaHa06g20750.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,332
- bp
- 6:54,302,316–54,310,054
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g20750
- eggNOG
- Preferred name: COL12 | Seed ortholog: 337451.A0A3S3QQX4 | COG: S | eggNOG OG: CCT@131567|A-1*, CCT@2759|t-6, CCT@3193|Ga-11, CCT@3398|Oh-14
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008150 biological_process; GO:0010629 negative regulation of gene expression; GO:0048579 negative regulation of long-day photoperiodism, flowering; GO:2000032 regulation of secondary shoot formation
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g20750.1-protein
derives_frommRNAPaHa06g20750.1
mRNAPaHa06g20750.1
part_ofgenePaHa06g20750
CDS
part_ofPaHa06g20750.1-CDS-6-1787993825:54302316..54302352mRNAPaHa06g20750.1
CDS
part_ofPaHa06g20750.1-CDS-6-1787993825:54302551..54302845mRNAPaHa06g20750.1
CDS
part_ofPaHa06g20750.1-CDS-6-1787993825:54305455..54305698mRNAPaHa06g20750.1
CDS
part_ofPaHa06g20750.1-CDS-6-1787993825:54308476..54308703mRNAPaHa06g20750.1
CDS
part_ofPaHa06g20750.1-CDS-6-1787993825:54309527..54310054mRNAPaHa06g20750.1
exon
part_ofPaHa06g20750.1-exon-6-1787993825:54302316..54302352mRNAPaHa06g20750.1
exon
part_ofPaHa06g20750.1-exon-6-1787993825:54302551..54302845mRNAPaHa06g20750.1
exon
part_ofPaHa06g20750.1-exon-6-1787993825:54305455..54305698mRNAPaHa06g20750.1
exon
part_ofPaHa06g20750.1-exon-6-1787993825:54308476..54308703mRNAPaHa06g20750.1
exon
part_ofPaHa06g20750.1-exon-6-1787993825:54309527..54310054mRNAPaHa06g20750.1
