Feature identity
- Identifier
- Pa10g1262.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,097 bp
- Genomic location
- Pa10:34,938,961–34,974,098
- Strand
- −
West Indian T2T · mRNA
Pa10g1262.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,097
- bp
- Pa10:34,938,961–34,974,098
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa10g1262
- eggNOG
- Preferred name: LACS6 | Seed ortholog: 337451.A0A443PSJ4 | COG: COG0318 | eggNOG OG: AMP-binding_C@131567|DWV-30, AMP-binding_C@2759|dCp-51, AMP-binding|U24XTC@131567, AMP-binding|U24XTC@3398
- Gene Ontology
- GO:0004467 long-chain fatty acid-CoA ligase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005777 peroxisome; GO:0006631 fatty acid metabolic process; GO:0009536 plastid; GO:0009651 response to salt stress; GO:0010193 response to ozone; GO:0102391 decanoate-CoA ligase activity
- KEGG
- EC: ec:6.2.1.3 | KO: K01897 | Pathway: 00061, 00071, 01100, 01212, 04146 | Module: M00086 | BRITE: 00001, 01000, 01004, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa10g1262.1-protein
derives_frommRNAPa10g1262.1
mRNAPa10g1262.1
part_ofgenePa10g1262
exon
part_ofPa10g1262.1:1mRNAPa10g1262.1
exon
part_ofPa10g1262.1:10mRNAPa10g1262.1
exon
part_ofPa10g1262.1:11mRNAPa10g1262.1
exon
part_ofPa10g1262.1:12mRNAPa10g1262.1
exon
part_ofPa10g1262.1:13mRNAPa10g1262.1
exon
part_ofPa10g1262.1:14mRNAPa10g1262.1
exon
part_ofPa10g1262.1:15mRNAPa10g1262.1
exon
part_ofPa10g1262.1:16mRNAPa10g1262.1
exon
part_ofPa10g1262.1:17mRNAPa10g1262.1
exon
part_ofPa10g1262.1:18mRNAPa10g1262.1
exon
part_ofPa10g1262.1:19mRNAPa10g1262.1
exon
part_ofPa10g1262.1:2mRNAPa10g1262.1
exon
part_ofPa10g1262.1:20mRNAPa10g1262.1
exon
part_ofPa10g1262.1:21mRNAPa10g1262.1
exon
part_ofPa10g1262.1:22mRNAPa10g1262.1
exon
part_ofPa10g1262.1:23mRNAPa10g1262.1
exon
part_ofPa10g1262.1:3mRNAPa10g1262.1
exon
part_ofPa10g1262.1:4mRNAPa10g1262.1
exon
part_ofPa10g1262.1:5mRNAPa10g1262.1
exon
part_ofPa10g1262.1:6mRNAPa10g1262.1
exon
part_ofPa10g1262.1:7mRNAPa10g1262.1
exon
part_ofPa10g1262.1:8mRNAPa10g1262.1
exon
part_ofPa10g1262.1:9mRNAPa10g1262.1
CDS
part_ofPa10g1262.1:cdsmRNAPa10g1262.1
