Feature identity
- Identifier
- Pa10g0380.3
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 597 bp
- Genomic location
- Pa10:8,239,825–8,262,041
- Strand
- −
West Indian T2T · mRNA
Pa10g0380.3
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 597
- bp
- Pa10:8,239,825–8,262,041
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa10g0380
- eggNOG
- Preferred name: LOC103700268 | Seed ortholog: 337451.A0A3S3N6J6 | COG: COG4539 | eggNOG OG: Mpo1-like@131567|C-2, Mpo1-like@1437183|as-20, Mpo1-like@3193|Hr-13
- Gene Ontology
- GO:0001561 fatty acid alpha-oxidation; GO:0003674 molecular_function; GO:0005575 cellular_component; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0008150 biological_process; GO:0046521 sphingoid catabolic process; GO:0102672 fatty acid alpha-dioxygenase activity
- KEGG
- EC: ec:1.14.18.12, ec:3.4.11.26 | KO: K18573, K24121 | BRITE: 00001, 01000, 01002
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa10g0380.3-protein
derives_frommRNAPa10g0380.3
exon
part_ofPa10g0380.1:4mRNAPa10g0380.3
exon
part_ofPa10g0380.1:5mRNAPa10g0380.3
exon
part_ofPa10g0380.1:6mRNAPa10g0380.3
mRNAPa10g0380.3
part_ofgenePa10g0380
exon
part_ofPa10g0380.3:9mRNAPa10g0380.3
CDS
part_ofPa10g0380.3:cdsmRNAPa10g0380.3
