Feature identity
- Identifier
- Pa10g0172.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,020 bp
- Genomic location
- Pa10:2,995,360–3,057,395
- Strand
- −
West Indian T2T · mRNA
Pa10g0172.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,020
- bp
- Pa10:2,995,360–3,057,395
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa10g0172
- eggNOG
- Preferred name: DFRA | Seed ortholog: 337451.A0A3S3QZP7 | COG: COG0451 | eggNOG OG: Epimerase@131567|KJ-12, Epimerase@1437183|JUd-27, Epimerase@3398|FUr-24
- Gene Ontology
- GO:0005575 cellular_component; GO:0005737 cytoplasm; GO:0005783 endoplasmic reticulum; GO:0005829 cytosol; GO:0008106 alcohol dehydrogenase (NADP+) activity; GO:0009407 toxin catabolic process; GO:0009507 chloroplast; GO:0016491 oxidoreductase activity; GO:0050832 defense response to fungus
- KEGG
- EC: ec:1.2.1.44 | KO: K09753 | Pathway: 00940, 01100, 01110 | Module: M00039 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa10g0172.1-protein
derives_frommRNAPa10g0172.1
mRNAPa10g0172.1
part_ofgenePa10g0172
exon
part_ofPa10g0172.1:1mRNAPa10g0172.1
exon
part_ofPa10g0172.1:2mRNAPa10g0172.1
exon
part_ofPa10g0172.1:3mRNAPa10g0172.1
exon
part_ofPa10g0172.1:4mRNAPa10g0172.1
exon
part_ofPa10g0172.1:5mRNAPa10g0172.1
CDS
part_ofPa10g0172.1:cdsmRNAPa10g0172.1
