Feature identity
- Identifier
- Pa08g1676.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 4,137 bp
- Genomic location
- Pa08:44,559,519–44,605,969
- Strand
- +
West Indian T2T · mRNA
Pa08g1676.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 4,137
- bp
- Pa08:44,559,519–44,605,969
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa08g1676
- eggNOG
- Preferred name: MED15A | Seed ortholog: 337451.A0A3S3N1I4 | eggNOG OG: KIX_2@131567|C-2, KIX_2@3193|Eg-11, KIX_2@58023|GS-12
- Gene Ontology
- GO:0003713 transcription coactivator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009751 response to salicylic acid; GO:0016592 mediator complex; GO:0031490 chromatin DNA binding; GO:0045723 positive regulation of fatty acid biosynthetic process
- KEGG
- EC: ec:2.3.1.48, ec:2.7.11.22 | KO: K14972 | Pathway: 03083, 03250 | BRITE: 00001, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa08g1676.1-protein
derives_frommRNAPa08g1676.1
mRNAPa08g1676.1
part_ofgenePa08g1676
exon
part_ofPa08g1676.1:1mRNAPa08g1676.1
exon
part_ofPa08g1676.1:10mRNAPa08g1676.1
exon
part_ofPa08g1676.1:11mRNAPa08g1676.1
exon
part_ofPa08g1676.1:2mRNAPa08g1676.1
exon
part_ofPa08g1676.1:3mRNAPa08g1676.1
exon
part_ofPa08g1676.1:4mRNAPa08g1676.1
exon
part_ofPa08g1676.1:5mRNAPa08g1676.1
exon
part_ofPa08g1676.1:6mRNAPa08g1676.1
exon
part_ofPa08g1676.1:7mRNAPa08g1676.1
exon
part_ofPa08g1676.1:8mRNAPa08g1676.1
exon
part_ofPa08g1676.1:9mRNAPa08g1676.1
CDS
part_ofPa08g1676.1:cdsmRNAPa08g1676.1
