Feature identity
- Identifier
- Pa08g0247.4
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 570 bp
- Genomic location
- Pa08:3,437,486–3,455,272
- Strand
- −
West Indian T2T · mRNA
Pa08g0247.4
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 570
- bp
- Pa08:3,437,486–3,455,272
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa08g0247
- eggNOG
- Preferred name: CHY1_0, LOC107812654 | Seed ortholog: 429701.A0A2G9G981, 49451.A0A314LDD5 | COG: S | eggNOG OG: ECH_2@131567|A-1, ECH_2@2759|Cq-13, ECH_2@4070|aK-23
- Gene Ontology
- GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity; GO:0005739 mitochondrion; GO:0006574 L-valine catabolic process; GO:0006635 fatty acid beta-oxidation; GO:0009409 response to cold; GO:0009536 plastid; GO:0009733 response to auxin
- KEGG
- EC: ec:3.1.2.4 | KO: K05605 | Pathway: 00280, 00410, 00640, 01100, 01200 | Module: M00013 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa08g0247.4-protein
derives_frommRNAPa08g0247.4
exon
part_ofPa08g0247.1:2mRNAPa08g0247.4
exon
part_ofPa08g0247.2:10mRNAPa08g0247.4
exon
part_ofPa08g0247.2:6mRNAPa08g0247.4
exon
part_ofPa08g0247.2:7mRNAPa08g0247.4
exon
part_ofPa08g0247.2:8mRNAPa08g0247.4
exon
part_ofPa08g0247.2:9mRNAPa08g0247.4
mRNAPa08g0247.4
part_ofgenePa08g0247
exon
part_ofPa08g0247.4:16mRNAPa08g0247.4
exon
part_ofPa08g0247.4:17mRNAPa08g0247.4
exon
part_ofPa08g0247.4:18mRNAPa08g0247.4
CDS
part_ofPa08g0247.4:cdsmRNAPa08g0247.4
