Feature identity
- Identifier
- PaHa07g06450.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,257 bp
- Genomic location
- 7:12,526,594–12,531,974
- Strand
- −
Hass · mRNA
PaHa07g06450.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,257
- bp
- 7:12,526,594–12,531,974
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g06450
- eggNOG
- Preferred name: LOC100808239 | Seed ortholog: 337451.A0A3S3NWH5 | COG: S | eggNOG OG: AAA@131567|Afu-19, AAA@2759|NSR-33, AAA_lid_3@131567|DL-10, AAA_lid_3@2759|Xn-16, AAA_lid_3@3193|NaB-40, AAA_lid_3@33090|Eyw-31
- Gene Ontology
- GO:0000502 proteasome complex; GO:0004175 endopeptidase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0008540 proteasome regulatory particle, base subcomplex; GO:0016887 ATP hydrolysis activity; GO:0017025 TBP-class protein binding; GO:0031625 ubiquitin protein ligase binding; GO:0036402 proteasome-activating activity; GO:0140296 general transcription initiation factor binding
- KEGG
- EC: ec:1.3.5.1 | KO: K03061 | Pathway: 03050 | Module: M00009, M00011, M00148 | BRITE: 00001, 03051
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g06450.1-protein
derives_frommRNAPaHa07g06450.1
mRNAPaHa07g06450.1
part_ofgenePaHa07g06450
CDS
part_ofPaHa07g06450.1-CDS-7-1787993825:12526594..12526751mRNAPaHa07g06450.1
CDS
part_ofPaHa07g06450.1-CDS-7-1787993825:12526980..12527155mRNAPaHa07g06450.1
CDS
part_ofPaHa07g06450.1-CDS-7-1787993825:12527350..12527531mRNAPaHa07g06450.1
CDS
part_ofPaHa07g06450.1-CDS-7-1787993825:12527635..12527853mRNAPaHa07g06450.1
CDS
part_ofPaHa07g06450.1-CDS-7-1787993825:12529274..12529418mRNAPaHa07g06450.1
CDS
part_ofPaHa07g06450.1-CDS-7-1787993825:12529833..12529894mRNAPaHa07g06450.1
CDS
part_ofPaHa07g06450.1-CDS-7-1787993825:12529997..12530074mRNAPaHa07g06450.1
CDS
part_ofPaHa07g06450.1-CDS-7-1787993825:12530164..12530255mRNAPaHa07g06450.1
CDS
part_ofPaHa07g06450.1-CDS-7-1787993825:12531417..12531498mRNAPaHa07g06450.1
CDS
part_ofPaHa07g06450.1-CDS-7-1787993825:12531912..12531974mRNAPaHa07g06450.1
exon
part_ofPaHa07g06450.1-exon-7-1787993825:12526594..12526751mRNAPaHa07g06450.1
exon
part_ofPaHa07g06450.1-exon-7-1787993825:12526980..12527155mRNAPaHa07g06450.1
exon
part_ofPaHa07g06450.1-exon-7-1787993825:12527350..12527531mRNAPaHa07g06450.1
exon
part_ofPaHa07g06450.1-exon-7-1787993825:12527635..12527853mRNAPaHa07g06450.1
exon
part_ofPaHa07g06450.1-exon-7-1787993825:12529274..12529418mRNAPaHa07g06450.1
exon
part_ofPaHa07g06450.1-exon-7-1787993825:12529833..12529894mRNAPaHa07g06450.1
exon
part_ofPaHa07g06450.1-exon-7-1787993825:12529997..12530074mRNAPaHa07g06450.1
exon
part_ofPaHa07g06450.1-exon-7-1787993825:12530164..12530255mRNAPaHa07g06450.1
exon
part_ofPaHa07g06450.1-exon-7-1787993825:12531417..12531498mRNAPaHa07g06450.1
exon
part_ofPaHa07g06450.1-exon-7-1787993825:12531912..12531974mRNAPaHa07g06450.1
