Feature identity
- Identifier
- Pa07g0304.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,680 bp
- Genomic location
- Pa07:3,807,032–3,814,232
- Strand
- +
West Indian T2T · mRNA
Pa07g0304.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,680
- bp
- Pa07:3,807,032–3,814,232
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa07g0304
- eggNOG
- Preferred name: 4CLL1 | Seed ortholog: 337451.A0A3S3P6K6 | COG: S | eggNOG OG: AMP-binding_C@131567|Drk-31, AMP-binding_C@3193|TGl-46, AMP-binding_C@35493|Ocj-43, AMP-binding|Z354F3@2759
- Gene Ontology
- GO:0004467 long-chain fatty acid-CoA ligase activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005783 endoplasmic reticulum; GO:0009507 chloroplast; GO:0009555 pollen development; GO:0016207 4-coumarate-CoA ligase activity; GO:0031956 medium-chain fatty acid-CoA ligase activity; GO:0046949 fatty-acyl-CoA biosynthetic process; GO:0080110 sporopollenin biosynthetic process
- KEGG
- EC: ec:6.2.1.12 | KO: K01904 | Pathway: 00130, 00940, 01100, 01110 | Module: M00039, M00137 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa07g0304.1-protein
derives_frommRNAPa07g0304.1
mRNAPa07g0304.1
part_ofgenePa07g0304
exon
part_ofPa07g0304.1:1mRNAPa07g0304.1
exon
part_ofPa07g0304.1:2mRNAPa07g0304.1
exon
part_ofPa07g0304.1:3mRNAPa07g0304.1
exon
part_ofPa07g0304.1:4mRNAPa07g0304.1
exon
part_ofPa07g0304.1:5mRNAPa07g0304.1
exon
part_ofPa07g0304.1:6mRNAPa07g0304.1
CDS
part_ofPa07g0304.1:cdsmRNAPa07g0304.1
