Feature identity
- Identifier
- Pa06g1977.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 900 bp
- Genomic location
- Pa06:45,586,735–45,604,109
- Strand
- −
West Indian T2T · mRNA
Pa06g1977.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 900
- bp
- Pa06:45,586,735–45,604,109
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa06g1977
- eggNOG
- Preferred name: OSIGBa0126B18.1 | Seed ortholog: 4432.A0A1U8AFD1 | COG: COG1028 | eggNOG OG: adh_short_C2@131567|AWH-19
- Gene Ontology
- GO:0000325 plant-type vacuole; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005777 peroxisome; GO:0006636 unsaturated fatty acid biosynthetic process; GO:0008150 biological_process; GO:0008670 2,4-dienoyl-CoA reductase (NADPH) activity; GO:0009062 fatty acid catabolic process; GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity; GO:0030437 ascospore formation; GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase
- KEGG
- EC: ec:1.3.1.124 | KO: K13237 | Pathway: 04146 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa06g1977.1-protein
derives_frommRNAPa06g1977.1
mRNAPa06g1977.1
part_ofgenePa06g1977
exon
part_ofPa06g1977.1:1mRNAPa06g1977.1
exon
part_ofPa06g1977.1:2mRNAPa06g1977.1
exon
part_ofPa06g1977.1:3mRNAPa06g1977.1
exon
part_ofPa06g1977.1:4mRNAPa06g1977.1
exon
part_ofPa06g1977.1:5mRNAPa06g1977.1
exon
part_ofPa06g1977.1:6mRNAPa06g1977.1
CDS
part_ofPa06g1977.1:cdsmRNAPa06g1977.1
