Feature identity
- Identifier
- Pa06g0400.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 3,981 bp
- Genomic location
- Pa06:5,104,309–5,124,420
- Strand
- −
West Indian T2T · mRNA
Pa06g0400.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,981
- bp
- Pa06:5,104,309–5,124,420
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa06g0400
- eggNOG
- Preferred name: MED15A | Seed ortholog: 337451.A0A3S3QRX7 | eggNOG OG: KIX_2@131567|C-2, KIX_2@3193|Eg-11, KIX_2@58023|GS-12
- Gene Ontology
- GO:0003713 transcription coactivator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009751 response to salicylic acid; GO:0016592 mediator complex; GO:0031490 chromatin DNA binding; GO:0045723 positive regulation of fatty acid biosynthetic process
- KEGG
- EC: ec:2.3.1.48, ec:2.7.11.22 | KO: K14972 | Pathway: 03083, 03250 | BRITE: 00001, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa06g0400.2-protein
derives_frommRNAPa06g0400.2
exon
part_ofPa06g0400.1:10mRNAPa06g0400.2
exon
part_ofPa06g0400.1:11mRNAPa06g0400.2
exon
part_ofPa06g0400.1:12mRNAPa06g0400.2
exon
part_ofPa06g0400.1:3mRNAPa06g0400.2
exon
part_ofPa06g0400.1:4mRNAPa06g0400.2
exon
part_ofPa06g0400.1:5mRNAPa06g0400.2
exon
part_ofPa06g0400.1:6mRNAPa06g0400.2
exon
part_ofPa06g0400.1:7mRNAPa06g0400.2
exon
part_ofPa06g0400.1:8mRNAPa06g0400.2
exon
part_ofPa06g0400.1:9mRNAPa06g0400.2
mRNAPa06g0400.2
part_ofgenePa06g0400
exon
part_ofPa06g0400.2:13mRNAPa06g0400.2
CDS
part_ofPa06g0400.2:cdsmRNAPa06g0400.2
