Feature identity
- Identifier
- Pa06g0070.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,881 bp
- Genomic location
- Pa06:1,266,686–1,273,029
- Strand
- −
West Indian T2T · mRNA
Pa06g0070.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,881
- bp
- Pa06:1,266,686–1,273,029
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa06g0070
- eggNOG
- Preferred name: CCD7 | Seed ortholog: 337451.A0A443PG96 | COG: COG3670 | eggNOG OG: RPE65@131567|B-2
- Gene Ontology
- GO:0009507 chloroplast; GO:0009536 plastid; GO:0009570 chloroplast stroma; GO:0009635 response to herbicide; GO:0009926 auxin polar transport; GO:0010223 secondary shoot formation; GO:0016121 carotene catabolic process; GO:0016124 xanthophyll catabolic process; GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; GO:0045549 9-cis-epoxycarotenoid dioxygenase activity; GO:1901601 strigolactone biosynthetic process
- KEGG
- EC: ec:1.13.11.68 | KO: K17912 | Pathway: 00906, 01110 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa06g0070.1-protein
derives_frommRNAPa06g0070.1
mRNAPa06g0070.1
part_ofgenePa06g0070
exon
part_ofPa06g0070.1:1mRNAPa06g0070.1
exon
part_ofPa06g0070.1:2mRNAPa06g0070.1
exon
part_ofPa06g0070.1:3mRNAPa06g0070.1
exon
part_ofPa06g0070.1:4mRNAPa06g0070.1
exon
part_ofPa06g0070.1:5mRNAPa06g0070.1
exon
part_ofPa06g0070.1:6mRNAPa06g0070.1
exon
part_ofPa06g0070.1:7mRNAPa06g0070.1
CDS
part_ofPa06g0070.1:cdsmRNAPa06g0070.1
