Feature identity
- Identifier
- PaHa01g22270.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,494 bp
- Genomic location
- 1:50,949,881–50,967,933
- Strand
- −
Hass · mRNA
PaHa01g22270.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,494
- bp
- 1:50,949,881–50,967,933
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g22270
- eggNOG
- Preferred name: APRR1 | Seed ortholog: 56857.A0A200QEU3 | COG: S | eggNOG OG: CCT@131567|A-1*, CCT@1462614|QS-15, CCT@2759|H-4, CCT@33090|BC-8, Response_reg|16CZRA@1462614, Response_reg|16CZRA@33090, Response_reg|16CZRA@58023
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0010031 circumnutation; GO:0010468 regulation of gene expression; GO:0010629 negative regulation of gene expression
- KEGG
- KO: K12127 | Pathway: 04712 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g22270.1-protein
derives_frommRNAPaHa01g22270.1
mRNAPaHa01g22270.1
part_ofgenePaHa01g22270
CDS
part_ofPaHa01g22270.1-CDS-1-1787993825:50949881..50950605mRNAPaHa01g22270.1
CDS
part_ofPaHa01g22270.1-CDS-1-1787993825:50950714..50950791mRNAPaHa01g22270.1
CDS
part_ofPaHa01g22270.1-CDS-1-1787993825:50950920..50951004mRNAPaHa01g22270.1
CDS
part_ofPaHa01g22270.1-CDS-1-1787993825:50966473..50966640mRNAPaHa01g22270.1
CDS
part_ofPaHa01g22270.1-CDS-1-1787993825:50966757..50966890mRNAPaHa01g22270.1
CDS
part_ofPaHa01g22270.1-CDS-1-1787993825:50967235..50967396mRNAPaHa01g22270.1
CDS
part_ofPaHa01g22270.1-CDS-1-1787993825:50967792..50967933mRNAPaHa01g22270.1
exon
part_ofPaHa01g22270.1-exon-1-1787993825:50949881..50950605mRNAPaHa01g22270.1
exon
part_ofPaHa01g22270.1-exon-1-1787993825:50950714..50950791mRNAPaHa01g22270.1
exon
part_ofPaHa01g22270.1-exon-1-1787993825:50950920..50951004mRNAPaHa01g22270.1
exon
part_ofPaHa01g22270.1-exon-1-1787993825:50966473..50966640mRNAPaHa01g22270.1
exon
part_ofPaHa01g22270.1-exon-1-1787993825:50966757..50966890mRNAPaHa01g22270.1
exon
part_ofPaHa01g22270.1-exon-1-1787993825:50967235..50967396mRNAPaHa01g22270.1
exon
part_ofPaHa01g22270.1-exon-1-1787993825:50967792..50967933mRNAPaHa01g22270.1
