Feature identity
- Identifier
- Pa05g1188.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,503 bp
- Genomic location
- Pa05:37,662,037–37,663,539
- Strand
- −
West Indian T2T · mRNA
Pa05g1188.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,503
- bp
- Pa05:37,662,037–37,663,539
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa05g1188
- eggNOG
- Preferred name: KCS38 | Seed ortholog: 3641.A0A061E6G5 | COG: S | eggNOG OG: ACP_syn_III_C@1437201|AkT-24, ACP_syn_III_C@2759|B-2!, ACP_syn_III_C@3193|CL-11, ACP_syn_III_C@3398|Hf-15, ACP_syn_III_C@35493|BW-10, FAE1_CUT1_RppA@131567|A-1, FAE1_CUT1_RppA@2759|Cj-13, FAE1_CUT1_RppA@3193|EP-15, FAE1_CUT1_RppA@3398|Xt-23
- Gene Ontology
- GO:0003824 catalytic activity; GO:0005783 endoplasmic reticulum; GO:0006633 fatty acid biosynthetic process; GO:0009409 response to cold; GO:0009416 response to light stimulus; GO:0009826 unidimensional cell growth; GO:0009922 fatty acid elongase activity; GO:0010025 wax biosynthetic process; GO:0016020 membrane; GO:0016049 cell growth; GO:0048868 pollen tube development; GO:0090378 seed trichome elongation
- KEGG
- EC: ec:2.3.1.199 | KO: K15397 | Pathway: 00062, 01100, 01110, 04626 | Module: M00415 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa05g1188.2-protein
derives_frommRNAPa05g1188.2
mRNAPa05g1188.2
part_ofgenePa05g1188
exon
part_ofPa05g1188.2:2mRNAPa05g1188.2
CDS
part_ofPa05g1188.2:cdsmRNAPa05g1188.2
