Pa04g2598.1

Record overview

Feature identity

Identifier: Pa04g2598.1
Feature type: mRNA
Genome collection: West Indian T2T
Organism: Persea americana-West Indian
Sequence length: 1,077 bp
Genomic location: Pa04:52,457,058–52,460,235
Strand: +

Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa04g2598

eggNOG: Preferred name: LOC103718238 | Seed ortholog: 337451.A0A3S3QVC2 | COG: COG1500 | eggNOG OG: SBDS@131567|C-2, SBDS_C@131567|A-1, SBDS_domain_II@131567|A-1
Gene Ontology: GO:0000922 spindle pole; GO:0001669 acrosomal vesicle; GO:0001833 inner cell mass cell proliferation; GO:0002244 hematopoietic progenitor cell differentiation; GO:0002573 myeloid leukocyte differentiation; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0005085 guanyl-nucleotide exchange factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006364 rRNA processing; GO:0006638 neutral lipid metabolic process; GO:0007052 mitotic spindle organization; GO:0008017 microtubule binding; GO:0008150 biological_process; GO:0019843 rRNA binding; GO:0030282 bone mineralization; GO:0030595 leukocyte chemotaxis; GO:0030687 preribosome, large subunit precursor; GO:0030851 granulocyte differentiation; GO:0031017 exocrine pancreas development; GO:0031143 pseudopodium; GO:0042134 rRNA primary transcript binding; GO:0042254 ribosome biogenesis; GO:0042256 cytosolic ribosome assembly; GO:0043022 ribosome binding; GO:0048539 bone marrow development; GO:0070180 large ribosomal subunit rRNA binding; GO:0070181 small ribosomal subunit rRNA binding; GO:0097014 ciliary plasm; GO:1990932 5.8S rRNA binding
KEGG: EC: ec:3.6.4.7, ec:5.6.2.4 | KO: K14574 | Pathway: 03008 | BRITE: 00001, 03009

Feature identity

Functional evidence

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