Feature identity
- Identifier
- Pa04g2838.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,250 bp
- Genomic location
- Pa04:55,650,178–55,692,984
- Strand
- +
West Indian T2T · mRNA
Pa04g2838.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,250
- bp
- Pa04:55,650,178–55,692,984
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa04g2838
- eggNOG
- Preferred name: LOC109001151 | Seed ortholog: 337451.A0A3S4PG43 | COG: S | eggNOG OG: WD40@131567|xz-17, WD40@2759|EOm-24
- Gene Ontology
- GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0009506 plasmodesma; GO:0009788 negative regulation of abscisic acid-activated signaling pathway; GO:0045717 negative regulation of fatty acid biosynthetic process; GO:0047484 regulation of response to osmotic stress; GO:0080008 Cul4-RING E3 ubiquitin ligase complex; GO:1901000 regulation of response to salt stress
- KEGG
- KO: K11807, K23325 | Pathway: 03013, 04814 | BRITE: 00001, 03012, 04121
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa04g2838.2-protein
derives_frommRNAPa04g2838.2
mRNAPa04g2838.2
part_ofgenePa04g2838
exon
part_ofPa04g2838.2:1mRNAPa04g2838.2
exon
part_ofPa04g2838.2:10mRNAPa04g2838.2
exon
part_ofPa04g2838.2:11mRNAPa04g2838.2
exon
part_ofPa04g2838.2:12mRNAPa04g2838.2
exon
part_ofPa04g2838.2:13mRNAPa04g2838.2
exon
part_ofPa04g2838.2:14mRNAPa04g2838.2
exon
part_ofPa04g2838.2:15mRNAPa04g2838.2
exon
part_ofPa04g2838.2:16mRNAPa04g2838.2
exon
part_ofPa04g2838.2:17mRNAPa04g2838.2
exon
part_ofPa04g2838.2:18mRNAPa04g2838.2
exon
part_ofPa04g2838.2:19mRNAPa04g2838.2
exon
part_ofPa04g2838.2:2mRNAPa04g2838.2
exon
part_ofPa04g2838.2:3mRNAPa04g2838.2
exon
part_ofPa04g2838.2:4mRNAPa04g2838.2
exon
part_ofPa04g2838.2:5mRNAPa04g2838.2
exon
part_ofPa04g2838.2:6mRNAPa04g2838.2
exon
part_ofPa04g2838.2:7mRNAPa04g2838.2
exon
part_ofPa04g2838.2:8mRNAPa04g2838.2
exon
part_ofPa04g2838.2:9mRNAPa04g2838.2
CDS
part_ofPa04g2838.2:cdsmRNAPa04g2838.2
