Feature identity
- Identifier
- Pa04g2788.3
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,221 bp
- Genomic location
- Pa04:55,078,776–55,081,046
- Strand
- −
West Indian T2T · mRNA
Pa04g2788.3
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,221
- bp
- Pa04:55,078,776–55,081,046
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa04g2788
- eggNOG
- Preferred name: LOC104605831, PLP1 | Seed ortholog: 337451.A0A3S3N0V1, 337451.A0A3S3P6F4, 337451.A0A3S3PGE7 | COG: COG3621, S | eggNOG OG: Patatin@131567|Bo-9, Patatin@1437183|VQt-52!, Patatin@1437183|VQu-52, Patatin@3193|Rio-45, Patatin@3398|UzC-51, Patatin@35493|Kdi-36
- Gene Ontology
- GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0006629 lipid metabolic process; GO:0009507 chloroplast; GO:0009626 plant-type hypersensitive response; GO:0012501 programmed cell death; GO:0016020 membrane; GO:0016298 lipase activity; GO:0031408 oxylipin biosynthetic process; GO:0042802 identical protein binding; GO:0046686 response to cadmium ion; GO:0051607 defense response to virus; GO:0071456 cellular response to hypoxia
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa04g2788.3-protein
derives_frommRNAPa04g2788.3
exon
part_ofPa04g2788.2:10mRNAPa04g2788.3
exon
part_ofPa04g2788.2:11mRNAPa04g2788.3
exon
part_ofPa04g2788.2:12mRNAPa04g2788.3
exon
part_ofPa04g2788.2:13mRNAPa04g2788.3
exon
part_ofPa04g2788.2:14mRNAPa04g2788.3
exon
part_ofPa04g2788.2:15mRNAPa04g2788.3
mRNAPa04g2788.3
part_ofgenePa04g2788
exon
part_ofPa04g2788.3:16mRNAPa04g2788.3
CDS
part_ofPa04g2788.3:cdsmRNAPa04g2788.3
